RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TMEM251Q8N6I4 163 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 AQP3Q92482 292 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 MESP1Q9BRJ9 268 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 ZNF552Q9H707 407 aaPredicted RBP11.21□□□□□ -0.62
SCN1B-202ENST00000415950 PITPNC1Q9UKF7 332 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 ATXN7O15265 892 aaPredicted RBP11.21□□□□□ -0.62
SCN1B-202ENST00000415950 PSG2P11465 335 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 ZNF385CQ66K41 422 aaPredicted RBP11.21□□□□□ -0.62
SCN1B-202ENST00000415950 OR1L6Q8NGR2 347 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 PCOLCE2Q9UKZ9 415 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 MS4A18H0YCH9 400 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
SCN1B-202ENST00000415950 MS4A18Q3C1V0 323 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 LRRC10Q5BKY1 277 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 MRGPRGQ86SM5 289 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 RPEQ96AT9 228 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 MDH2P40926 338 aaKnown RBP11.2□□□□□ -0.62
SCN1B-202ENST00000415950 RAC3P60763 192 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 C1orf100Q5SVJ3 147 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 RTN4RL2Q86UN3 420 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 GPX7Q96SL4 187 aaPredicted RBP11.2□□□□□ -0.62
SCN1B-202ENST00000415950 GABRG3Q99928 467 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 RTN4RQ9BZR6 473 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 BRCA1P38398 1863 aaKnown RBP11.2□□□□□ -0.62
SCN1B-202ENST00000415950 IGHV3-21A0A0B4J1V1 117 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 A0A1W2PPE3 182 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 CD1AP06126 327 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 CCL3P10147 92 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 CCL4P13236 92 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 TNFRSF1AP19438 455 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 RND3P61587 244 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 FOXO1Q12778 655 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 TUSC5Q8IXB3 177 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 OR51M1Q9H341 326 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 G6PC2Q9NQR9 355 aa11.2□□□□□ -0.62
SCN1B-202ENST00000415950 CDS2O95674 445 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 PMELP40967 661 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 ADAMTS17Q8TE56 1095 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 LHFPL6Q9Y693 200 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 OR5B21A6NL26 309 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 MELTFP08582 738 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 SCTP09683 121 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 EGR1P18146 543 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 ATP6V1FQ16864 119 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 GGACTQ9BVM4 153 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 ONECUT1Q9UBC0 465 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 J3QRE1 110 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 DEDDO75618 318 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 CD8AP01732 235 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 COL8A1P27658 744 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 WNT5AP41221 380 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 MEOX1P50221 254 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 TMEM50BP56557 158 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 PKIAP61925 76 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 SMAD4Q13485 552 aaKnown RBP11.19□□□□□ -0.62
SCN1B-202ENST00000415950 GAB4Q2WGN9 574 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 WDR73Q6P4I2 378 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 TGIF2LYQ8IUE0 185 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 HES7Q9BYE0 225 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 DUSP15Q9H1R2 295 aaPredicted RBP11.19□□□□□ -0.62
SCN1B-202ENST00000415950 CACFD1Q9UGQ2 172 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 WDR81Q562E7 1941 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 ZIC3O60481 467 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 ZNF766Q5HY98 468 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 VAX1Q5SQQ9 334 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 REG4Q9BYZ8 158 aa11.19□□□□□ -0.62
SCN1B-202ENST00000415950 HELTA6NFD8 242 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 MT-CO3P00414 261 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 IGFBP7Q16270 282 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 SLC35E4Q6ICL7 350 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 ZNF519Q8TB69 540 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 IGHV4-34P06331 123 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 SRD5A2P31213 254 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 MFAP2P55001 183 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 C16orf82Q7Z2V1 217 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 TMPRSS2O15393 492 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 SP1P08047 785 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 FCGR3AP08637 254 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 TNXAQ16473 311 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 PDPNQ86YL7 162 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 AQP10Q96PS8 301 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 MYO7BQ6PIF6 2116 aa11.18□□□□□ -0.62
SCN1B-202ENST00000415950 DIRC3C9JPN6 131 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 LSM6P62312 80 aaKnown RBP11.17□□□□□ -0.62
SCN1B-202ENST00000415950 OR8A1Q8NGG7 326 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 HSPB9Q9BQS6 159 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 TNFAIP6P98066 277 aaPredicted RBP11.17□□□□□ -0.62
SCN1B-202ENST00000415950 AESQ08117 197 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 RHBDD2Q6NTF9 364 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 C19orf35Q6ZS72 473 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 OR4A4PQ8NGN8 299 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 PCGF1Q9BSM1 259 aa11.17□□□□□ -0.62
SCN1B-202ENST00000415950 CHST5Q9GZS9 411 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms