RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 S1PR3Q99500 378 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 MRPS26Q9BYN8 205 aaKnown RBP11.8□□□□□ -0.52
CHD1-202ENST00000414220 RNF167Q9H6Y7 350 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 DIABLOQ9NR28 239 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 A0A1W2PPI3 338 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 FAM90A9PA6NNJ1 464 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 SNRNP70P08621 437 aaKnown RBP11.79□□□□□ -0.52
CHD1-202ENST00000414220 GSTP1P09211 210 aaKnown RBP11.79□□□□□ -0.52
CHD1-202ENST00000414220 CLEC2LP0C7M8 214 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 CD1BP29016 333 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 CEACAM6P40199 344 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 REG1BP48304 166 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 ZNF137PP52743 207 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 PROK1P58294 105 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 LSM3P62310 102 aaKnown RBP11.79□□□□□ -0.52
CHD1-202ENST00000414220 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 MOGAT2Q3SYC2 334 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 CDNFQ49AH0 187 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 OR4A4PQ8NGN8 299 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 LGALS14Q8TCE9 139 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 HDHD3Q9BSH5 251 aaPredicted RBP11.79□□□□□ -0.52
CHD1-202ENST00000414220 FUNDC2Q9BWH2 189 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 RHBDL2Q9NX52 303 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 SLC23A1Q9UHI7 598 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 MOB4Q9Y3A3 225 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 STAB1Q9NY15 2570 aa11.79□□□□□ -0.52
CHD1-202ENST00000414220 A0A0A6YYH2 397 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 A6NJ64 397 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 MFNGO00587 321 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 ITGB1BP1O14713 200 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 RAB29O14966 203 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 SLC31A2O15432 143 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 LANCL1O43813 399 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 VDAC2P45880 294 aaPredicted RBP11.78□□□□□ -0.52
CHD1-202ENST00000414220 ZNF134P52741 427 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 GNG2P59768 71 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 SRSF7Q16629 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD1-202ENST00000414220 ST6GALNAC6Q969X2 333 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD1-202ENST00000414220 SPATA2Q9UM82 520 aa11.78□□□□□ -0.52
CHD1-202ENST00000414220 M0QZ24 198 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 FABP7O15540 132 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 FGF16O43320 207 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 DIRAS3O95661 229 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 FCGR3AP08637 254 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 SCTP09683 121 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 VSIG10L2P0DP72 767 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 DTYMKP23919 212 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 DIAPH2-AS1Q14236 149 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 HABP2Q14520 560 aaPredicted RBP11.77□□□□□ -0.53
CHD1-202ENST00000414220 HNF4GQ14541 408 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 GNMTQ14749 295 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 PNLIPRP3Q17RR3 467 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 HACD4Q5VWC8 232 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 FAM71F2Q6NXP2 309 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 GPR141Q7Z602 305 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 IZUMO1Q8IYV9 350 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 Q8N2B8 174 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 OR8H1Q8NGG4 311 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 OR13F1Q8NGS4 319 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 OR10J5Q8NHC4 309 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 CFHR4Q92496 578 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 S100A16Q96FQ6 103 aaKnown RBP11.77□□□□□ -0.53
CHD1-202ENST00000414220 DCSTAMPQ9H295 470 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 ZNF221Q9UK13 617 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 KCNK7Q9Y2U2 307 aa11.77□□□□□ -0.53
CHD1-202ENST00000414220 NCBP2LA6PVI3 153 aaKnown RBP11.76□□□□□ -0.53
CHD1-202ENST00000414220 MOSP00540 346 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 CTXN2P0C2S0 81 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 RPS19P39019 145 aaKnown RBP11.76□□□□□ -0.53
CHD1-202ENST00000414220 BLCAPP62952 87 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 EBI3Q14213 229 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 HERPUD1Q15011 391 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 ABCA11PQ4W5N1 156 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 C9orf152Q5JTZ5 239 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 FAM53AQ6NSI3 398 aaPredicted RBP11.76□□□□□ -0.53
CHD1-202ENST00000414220 KLHDC1Q8N7A1 406 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 KCTD12Q96CX2 325 aaKnown RBP11.76□□□□□ -0.53
CHD1-202ENST00000414220 CITED1Q99966 193 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 GINS4Q9BRT9 223 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 ZNF702PQ9H963 129 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 SIGLEC9Q9Y336 463 aa11.76□□□□□ -0.53
CHD1-202ENST00000414220 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
CHD1-202ENST00000414220 IGHV3-72A0A0B4J1Y9 119 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 BET1O15155 118 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 ST8SIA5O15466 376 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 Q6ZS49 121 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 ANKRD13BQ86YJ7 626 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 CYYR1Q96J86 154 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 EAF1Q96JC9 268 aaPredicted RBP11.75□□□□□ -0.53
CHD1-202ENST00000414220 ST6GALNAC5Q9BVH7 336 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 DNHD1Q96M86 4753 aa11.75□□□□□ -0.53
CHD1-202ENST00000414220 TRAV18A0A075B6X5 111 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 GSTT2P0CG29 244 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 GSTT2BP0CG30 244 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 SMIM18P0DKX4 95 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 MC5RP33032 325 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 GPR12P47775 334 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms