RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CABLES2Q9BTV7 478 aa10.55□□□□□ -0.72
HDAC8-210ENST00000412342 ABHD14AQ9BUJ0 271 aa10.55□□□□□ -0.72
HDAC8-210ENST00000412342 TOLLIPQ9H0E2 274 aa10.55□□□□□ -0.72
HDAC8-210ENST00000412342 ABCG5Q9H222 651 aa10.55□□□□□ -0.72
HDAC8-210ENST00000412342 IFI27L2Q9H2X8 130 aa10.55□□□□□ -0.72
HDAC8-210ENST00000412342 C16orf95Q9H693 158 aa10.55□□□□□ -0.72
HDAC8-210ENST00000412342 OR1A1Q9P1Q5 309 aa10.55□□□□□ -0.72
HDAC8-210ENST00000412342 ZNF230Q9UIE0 474 aaPredicted RBP10.55□□□□□ -0.72
HDAC8-210ENST00000412342 IGKV1D-8A0A087WSZ0 117 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 IGHV1-3A0A0C4DH29 117 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 TMEM235A6NFC5 223 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 TRDCB7Z8K6 153 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 ITGB1BP1O14713 200 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 CRYBA1P05813 215 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 DTYMKP23919 212 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 BRS3P32247 399 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
HDAC8-210ENST00000412342 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 DRAM1Q8N682 238 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 OR56B4Q8NH76 319 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 NUDCD2Q8WVJ2 157 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 RTN4IP1Q8WWV3 396 aaPredicted RBP10.54□□□□□ -0.72
HDAC8-210ENST00000412342 IL1F10Q8WWZ1 152 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 MAFIPQ8WZ33 124 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
HDAC8-210ENST00000412342 AGMATQ9BSE5 352 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 DCSTAMPQ9H295 470 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 RANBP3Q9H6Z4 567 aaPredicted RBP10.54□□□□□ -0.72
HDAC8-210ENST00000412342 RAB18Q9NP72 206 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 PITPNC1Q9UKF7 332 aa10.54□□□□□ -0.72
HDAC8-210ENST00000412342 CLPSL1A2RUU4 121 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 FABP7O15540 132 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 RGS11O94810 467 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 GAPDHP04406 335 aaKnown RBP10.53□□□□□ -0.72
HDAC8-210ENST00000412342 GSTT2P0CG29 244 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 GSTT2BP0CG30 244 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 IL3RAP26951 378 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 MNDAP41218 407 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 REG1BP48304 166 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 PROK1P58294 105 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 ARFRP1Q13795 201 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 EBI3Q14213 229 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 PNLIPRP3Q17RR3 467 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 UBE2NLQ5JXB2 153 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 ZNF833PQ6ZTB9 187 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 THNSL2Q86YJ6 484 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 OR4A4PQ8NGN8 299 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 ZNF251Q9BRH9 671 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 ZNF702PQ9H963 129 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 SLC23A1Q9UHI7 598 aa10.53□□□□□ -0.72
HDAC8-210ENST00000412342 TRAV18A0A075B6X5 111 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 TRBV6-7A0A0A0MS04 114 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 A0A1B0GUS0 222 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 ST8SIA5O15466 376 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 LANCL1O43813 399 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 OR2F2O95006 317 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 DIRAS3O95661 229 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 AMY1AP04745 511 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 AMY2AP04746 511 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 SNRNP70P08621 437 aaKnown RBP10.52□□□□□ -0.73
HDAC8-210ENST00000412342 ZBTB25P24278 435 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 KIR2DS4P43632 304 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 ARHGDIBP52566 201 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 KRTAP10-3P60369 221 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 MRPS15P82914 257 aaKnown RBP10.52□□□□□ -0.73
HDAC8-210ENST00000412342 KIR2DS1Q14954 304 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 SPCS2Q15005 226 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 IGSF11Q5DX21 431 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 Q6ZS46 218 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 CLVS1Q8IUQ0 354 aaPredicted RBP10.52□□□□□ -0.73
HDAC8-210ENST00000412342 IZUMO1Q8IYV9 350 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 LYG1Q8N1E2 194 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 Q8N2B8 174 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 Q8N6K4 173 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 SAMD12Q8N8I0 201 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 OR2AK2Q8NG84 335 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 CAPSLQ8WWF8 208 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 WFDC12Q8WWY7 111 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 RBM14Q96PK6 669 aaKnown RBP10.52□□□□□ -0.73
HDAC8-210ENST00000412342 ZNF747Q9BV97 191 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 NPFFR1Q9GZQ6 430 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 C11orf54Q9H0W9 315 aaPredicted RBP10.52□□□□□ -0.73
HDAC8-210ENST00000412342 AUNIPQ9H7T9 357 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 BEX1Q9HBH7 125 aa10.52□□□□□ -0.73
HDAC8-210ENST00000412342 SAA2-SAA4A0A096LPE2 208 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 ZNF736B4DX44 427 aaPredicted RBP10.51□□□□□ -0.73
HDAC8-210ENST00000412342 TXNL1O43396 289 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 XRCC3O43542 346 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 PROP1O75360 226 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 EIF4EP06730 217 aaKnown RBP10.51□□□□□ -0.73
HDAC8-210ENST00000412342 SAA2P0DJI9 122 aaPredicted RBP10.51□□□□□ -0.73
HDAC8-210ENST00000412342 PTHLHP12272 177 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 CEACAM6P40199 344 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 OR3A3P47888 321 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 RORCP51449 518 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 BLCAPP62952 87 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 PITPNAQ00169 270 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 C16orf82Q7Z2V1 217 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
HDAC8-210ENST00000412342 RAB2BQ8WUD1 216 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms