RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 NWD2Q9ULI1 1742 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 NDUFS8O00217 210 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 GNG10P50151 68 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 TMPRSS3P57727 454 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 GGTLC2Q14390 218 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 MEGF10Q96KG7 1140 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 QTRT1Q9BXR0 403 aaKnown RBP6.47□□□□□ -1.37
PTPN3-203ENST00000412145 PLCH1Q4KWH8 1693 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 TRAV39A0A0B4J263 110 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 A0A0U1RQS6 177 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 SPINK4O60575 86 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 TRGC2P03986 189 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 DEFB109BQ30KR1 87 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF774Q6NX45 483 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 LDLRAD3Q86YD5 345 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 SHISA4Q96DD7 197 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 CRISPLD2Q9H0B8 497 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 TMEM222Q9H0R3 208 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 RABAC1Q9UI14 185 aa6.47□□□□□ -1.37
PTPN3-203ENST00000412145 IGLV3-16A0A075B6K0 115 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 RNF167Q9H6Y7 350 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 TPRP12270 2363 aaKnown RBP6.46□□□□□ -1.37
PTPN3-203ENST00000412145 EDIL3O43854 480 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 ANOS1P23352 680 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 POLR2GP62487 172 aaKnown RBP eCLIP6.46□□□□□ -1.37
PTPN3-203ENST00000412145 SP6Q3SY56 376 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 RNFT1Q5M7Z0 435 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 GAPTQ8N292 157 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF645Q8N7E2 425 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 ANKRD10Q9NXR5 420 aa6.46□□□□□ -1.37
PTPN3-203ENST00000412145 CEACAM18A8MTB9 384 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 MGST3O14880 152 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 FCMRO60667 390 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 HOXA5P20719 270 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 C2orf83Q53S99 150 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 NIT1Q86X76 327 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 LINC00052Q96N35 136 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 MYO5AQ9Y4I1 1855 aaKnown RBP6.46□□□□□ -1.38
PTPN3-203ENST00000412145 TSPAN7P41732 249 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 GUCA2AQ02747 115 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 CNRIP1Q96F85 164 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-203ENST00000412145 FTH1P19P0C7X4 201 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 PCP4P48539 62 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 PCBP3P57721 371 aaKnown RBP6.46□□□□□ -1.38
PTPN3-203ENST00000412145 ACER2Q5QJU3 275 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 C9orf50Q5SZB4 431 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 NCMAPQ5T1S8 102 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 RIPPLY2Q5TAB7 128 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 TNRC6CQ9HCJ0 1690 aaKnown RBP6.46□□□□□ -1.38
PTPN3-203ENST00000412145 FXYD1O00168 92 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 GPX4P36969 197 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-203ENST00000412145 MFAP4P55083 255 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 WIPI1Q5MNZ9 446 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-203ENST00000412145 Q6ZNB5 142 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF600Q6ZNG1 722 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 DTX2Q86UW9 622 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 PGLYRP3Q96LB9 341 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 PGPEP1Q9NXJ5 209 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 TMEFF2Q9UIK5 374 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-203ENST00000412145 DOCK2Q92608 1830 aa6.46□□□□□ -1.38
PTPN3-203ENST00000412145 NPFFO15130 113 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 PAQR9Q6ZVX9 377 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 FAM181BA6NEQ2 426 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 MOSPD3O75425 235 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 LINC00869P0C866 280 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 PNLIPP16233 465 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 CNTFRP26992 372 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF83P51522 516 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 B4GALNT1Q00973 533 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 PRNTQ86SH4 94 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 CCL17Q92583 94 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 C5orf30Q96GV9 206 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 ST6GAL2Q96JF0 529 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 SSBP4Q9BWG4 385 aaPredicted RBP6.45□□□□□ -1.38
PTPN3-203ENST00000412145 PXMP4Q9Y6I8 212 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 NPIPB8E9PQR5 432 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 TMPRSS2O15393 492 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 RPL27AP46776 148 aaKnown RBP6.45□□□□□ -1.38
PTPN3-203ENST00000412145 UCP2P55851 309 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 SH2D5Q6ZV89 423 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 FAM57AQ8TBR7 257 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 PKD1L3Q7Z443 1732 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 PRSS23O95084 383 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 CLDN14O95500 239 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 MMDQ15546 238 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 CLDN16Q9Y5I7 305 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF658BQ4V348 819 aaPredicted RBP6.45□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF506Q5JVG8 444 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 ZNF683Q8IZ20 524 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 CIARTQ8N365 385 aaPredicted RBP6.45□□□□□ -1.38
PTPN3-203ENST00000412145 SARGQ9BW04 601 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 OR2H1Q9GZK4 316 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 MRPL18Q9H0U6 180 aaKnown RBP6.45□□□□□ -1.38
PTPN3-203ENST00000412145 SMPXQ9UHP9 88 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 AGAP20933 346 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 KRTCAP3Q53RY4 240 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 C1QTNF12Q5T7M4 302 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 DNM1P46Q6ZS02 220 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 GATAD1Q8WUU5 269 aa6.45□□□□□ -1.38
PTPN3-203ENST00000412145 UBE2FQ969M7 185 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms