RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 COQ3Q9NZJ6 369 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 RNF150Q9ULK6 438 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 ZNF835Q9Y2P0 537 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 RNF115Q9Y4L5 304 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 IGHV3OR15-7A0A075B7D8 119 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 RNF212BA8MTL3 300 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 WRBO00258 174 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 TMEM50AO95807 157 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 ASCL1P50553 236 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 EDDM3AQ14507 147 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 IZUMO4Q1ZYL8 232 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 FAM209AQ5JX71 171 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 IL34Q6ZMJ4 242 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 TMEM252Q8N6L7 170 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 SNRNP40Q96DI7 357 aaKnown RBP20.52■□□□□ 0.88
VRK2-202ENST00000412104 C5orf30Q96GV9 206 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 SLC25A31Q9H0C2 315 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 ELOVL5Q9NYP7 299 aa20.52■□□□□ 0.88
VRK2-202ENST00000412104 SIGLEC5O15389 551 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 IGKV1-5P01602 117 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 APOC3P02656 99 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 SEC11BP0C7V7 166 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 PPP1CCP36873 323 aaKnown RBP20.51■□□□□ 0.87
VRK2-202ENST00000412104 AKR1C2P52895 323 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 Q6ZRM9 215 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 ZBTB34Q8NCN2 500 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 MSRB2Q9Y3D2 182 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 ATMQ13315 3056 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 C16orf97H3BN30 126 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 CHST1O43916 411 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 SPP1P10451 314 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 SELENOVP59797 346 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 BLOC1S1P78537 153 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 AKR1C1Q04828 323 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 PJVKQ0ZLH3 352 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 DCTN5Q9BTE1 182 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 SEBOXQ9HB31 216 aaPredicted RBP20.51■□□□□ 0.87
VRK2-202ENST00000412104 CACNG5Q9UF02 275 aa20.51■□□□□ 0.87
VRK2-202ENST00000412104 MEX3AA1L020 520 aaKnown RBP20.5■□□□□ 0.87
VRK2-202ENST00000412104 KIAA1324LA8MWY0 1029 aaPredicted RBP20.5■□□□□ 0.87
VRK2-202ENST00000412104 LHBP01229 141 aa20.5■□□□□ 0.87
VRK2-202ENST00000412104 GATA4P43694 442 aa20.5■□□□□ 0.87
VRK2-202ENST00000412104 TRAT1Q6PIZ9 186 aa20.5■□□□□ 0.87
VRK2-202ENST00000412104 ODF3L1Q8IXM7 274 aa20.5■□□□□ 0.87
VRK2-202ENST00000412104 PARP11Q9NR21 331 aa20.5■□□□□ 0.87
VRK2-202ENST00000412104 FAM212BQ9NTI7 297 aaPredicted RBP20.5■□□□□ 0.87
VRK2-202ENST00000412104 DMXL2Q8TDJ6 3036 aa20.5■□□□□ 0.87
VRK2-202ENST00000412104 B8ZZF3 427 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 C15orf65H3BRN8 121 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 OMGP23515 440 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 SRSF3P84103 164 aaKnown RBP20.49■□□□□ 0.87
VRK2-202ENST00000412104 EIF4EBP1Q13541 118 aaPredicted RBP20.49■□□□□ 0.87
VRK2-202ENST00000412104 CLINT1Q14677 625 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 Q6ZRG5 221 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 NUP37Q8NFH4 326 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 SNX22Q96L94 193 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 RP1L1Q8IWN7 2480 aaPredicted RBP20.49■□□□□ 0.87
VRK2-202ENST00000412104 IGHV3-43A0A0B4J1X8 118 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 IGHV3-43DP0DP04 118 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 PAX9P55771 341 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 TMEM108Q6UXF1 575 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 ZNF808Q8N4W9 903 aaPredicted RBP20.49■□□□□ 0.87
VRK2-202ENST00000412104 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.49■□□□□ 0.87
VRK2-202ENST00000412104 HSD17B11Q8NBQ5 300 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 RFESDQ8TAC1 157 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 SH3BGRL3Q9H299 93 aa20.49■□□□□ 0.87
VRK2-202ENST00000412104 SPINT2O43291 252 aa20.48■□□□□ 0.87
VRK2-202ENST00000412104 IGHV1-46P01743 117 aa20.48■□□□□ 0.87
VRK2-202ENST00000412104 SWI5Q1ZZU3 235 aa20.48■□□□□ 0.87
VRK2-202ENST00000412104 BTNL8Q6UX41 500 aa20.48■□□□□ 0.87
VRK2-202ENST00000412104 PPP1R35Q8TAP8 253 aa20.48■□□□□ 0.87
VRK2-202ENST00000412104 JKAMPQ9P055 326 aa20.48■□□□□ 0.87
VRK2-202ENST00000412104 ODAMA1E959 279 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 TMEM218A2RU14 115 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 ABCD4O14678 606 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 MGST3O14880 152 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 FAM87AP0C7U9 286 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 NHLH1Q02575 133 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 BAXQ07812 192 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 ZNF266Q14584 549 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 WFDC8Q8IUA0 241 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 CST7O76096 145 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 DANCRP0C864 163 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 F2RL1P55085 397 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 RPL30P62888 115 aaKnown RBP20.47■□□□□ 0.87
VRK2-202ENST00000412104 HTD2P86397 168 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 TNFAIP6P98066 277 aaPredicted RBP20.47■□□□□ 0.87
VRK2-202ENST00000412104 MSMO1Q15800 293 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 ZNF295-AS1Q8N0V1 137 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 IL19Q9UHD0 177 aa20.47■□□□□ 0.87
VRK2-202ENST00000412104 PTAFRP25105 342 aa20.46■□□□□ 0.87
VRK2-202ENST00000412104 CD80P33681 288 aa20.46■□□□□ 0.87
VRK2-202ENST00000412104 ID4P47928 161 aa20.46■□□□□ 0.87
VRK2-202ENST00000412104 ZNRF1Q8ND25 227 aa20.46■□□□□ 0.87
VRK2-202ENST00000412104 OR5C1Q8NGR4 320 aa20.46■□□□□ 0.87
VRK2-202ENST00000412104 GCM1Q9NP62 436 aa20.46■□□□□ 0.87
VRK2-202ENST00000412104 GFRA3O60609 400 aa20.45■□□□□ 0.86
VRK2-202ENST00000412104 RAMP3O60896 148 aa20.45■□□□□ 0.86
VRK2-202ENST00000412104 ADH4P08319 380 aa20.45■□□□□ 0.86
VRK2-202ENST00000412104 DYNLT3P51808 116 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms