RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 IGFBP3P17936 291 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-220ENST00000411464 FUT3P21217 361 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 PPP1CCP36873 323 aaKnown RBP12.9□□□□□ -0.34
MRPL55-220ENST00000411464 ETV1P50549 477 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 PITPNAQ00169 270 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 TMEM267Q0VDI3 215 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-220ENST00000411464 GNMTQ14749 295 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 OR2G6Q5TZ20 316 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 ZNF660Q6AZW8 331 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-220ENST00000411464 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 GHSRQ92847 366 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 FLYWCH2Q96CP2 140 aaKnown RBP12.9□□□□□ -0.34
MRPL55-220ENST00000411464 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 SELENOIQ9C0D9 397 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 BANF2Q9H503 90 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-220ENST00000411464 BABAM2Q9NXR7 383 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 IGHV4OR15-8A0A075B7B6 117 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 A0A087WW49 117 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 LOC100130705A0A1B0GUX0 176 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 OGG1O15527 345 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 YPEL1O60688 119 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 GPX5O75715 221 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 SC5DO75845 299 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 NDUFA3O95167 84 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 DCKP27707 260 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 OR3A3P47888 321 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 PLGLAQ15195 96 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 AWAT2Q6E213 333 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 ODF3L1Q8IXM7 274 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 TCTEX1D1Q8N7M0 179 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 OR13C5Q8NGS8 318 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 GALMQ96C23 342 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 ISOC1Q96CN7 298 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 YPEL2Q96QA6 119 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 TM2D3Q9BRN9 247 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 TPSG1Q9NRR2 321 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
MRPL55-220ENST00000411464 A3GALT2U3KPV4 340 aa12.89□□□□□ -0.35
MRPL55-220ENST00000411464 TRAV8-7A0A075B6U6 113 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 TRBV5-5A0A0J9YX44 114 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 SOX15O60248 233 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 CRTAPO75718 401 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-220ENST00000411464 MAS1P04201 325 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 HSPB1P04792 205 aaKnown RBP12.88□□□□□ -0.35
MRPL55-220ENST00000411464 MGMTP16455 207 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 CD40LGP29965 261 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 CX3CL1P78423 397 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 HTD2P86397 168 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 Q499Y3 187 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 PYHIN1Q6K0P9 492 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 ZNF833PQ6ZTB9 187 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 OR2AK2Q8NG84 335 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 ELOVL1Q9BW60 279 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 RNF150Q9ULK6 438 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 SORL1Q92673 2214 aa12.88□□□□□ -0.35
MRPL55-220ENST00000411464 SAA2-SAA4A0A096LPE2 208 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 ARPC1BO15143 372 aaKnown RBP12.87□□□□□ -0.35
MRPL55-220ENST00000411464 IGHV3-11P01762 117 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 SAA2P0DJI9 122 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-220ENST00000411464 IGHV4-30-4P0DP06 118 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 MYL12AP19105 171 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-220ENST00000411464 NDPQ00604 133 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 YIF1BQ5BJH7 314 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 C19orf54Q5BKX5 351 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 LY6G6FQ5SQ64 297 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 C5orf24Q7Z6I8 188 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 SGPP2Q8IWX5 399 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 APH1BQ8WW43 257 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 RDH12Q96NR8 316 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 C9orf16Q9BUW7 83 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 FBXL15Q9H469 300 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 NUBP2Q9Y5Y2 271 aa12.87□□□□□ -0.35
MRPL55-220ENST00000411464 RRHO14718 337 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 FSTP19883 344 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 SMN1Q16637 294 aaKnown RBP12.86□□□□□ -0.35
MRPL55-220ENST00000411464 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 ACTBL2Q562R1 376 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 DMKNQ6E0U4 476 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-220ENST00000411464 FAM131AQ6UXB0 335 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 LYPD6Q86Y78 171 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 ANKRD13BQ86YJ7 626 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 CDH26Q8IXH8 852 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 MRPL30Q8TCC3 161 aaKnown RBP12.86□□□□□ -0.35
MRPL55-220ENST00000411464 Q96M66 194 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 MS4A10Q96PG2 267 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 ABRACLQ9P1F3 81 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 STEAP1Q9UHE8 339 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 STUB1Q9UNE7 303 aa12.86□□□□□ -0.35
MRPL55-220ENST00000411464 RRP15Q9Y3B9 282 aaKnown RBP12.86□□□□□ -0.35
MRPL55-220ENST00000411464 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms