RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 ST8SIA3O43173 380 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 CCL2P13500 99 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 ZNF565Q8N9K5 539 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 GPHA2Q96T91 129 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 MIOXQ9UGB7 285 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 HSF4Q9ULV5 492 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 RAI1Q7Z5J4 1906 aaPredicted RBP14.24□□□□□ -0.13
GCFC2-202ENST00000409857 NDUFS6O75380 124 aaKnown RBP14.24□□□□□ -0.13
GCFC2-202ENST00000409857 TUBG1P23258 451 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 OMGP23515 440 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 DTYMKP23919 212 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 NKX6-1P78426 367 aaPredicted RBP14.24□□□□□ -0.13
GCFC2-202ENST00000409857 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 SLAMF9Q96A28 289 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 SUCNR1Q9BXA5 334 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 TUBG2Q9NRH3 451 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 CADP27708 2225 aa14.24□□□□□ -0.13
GCFC2-202ENST00000409857 LCATP04180 440 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 AADACP22760 399 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 EWSR1Q01844 656 aaKnown RBP eCLIP14.23□□□□□ -0.13
GCFC2-202ENST00000409857 TLE4Q04727 773 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 COLCA1Q6ZS62 124 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 LGI3Q8N145 548 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 OR1J1Q8NGS3 322 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 BORCS8Q96FH0 119 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 TRBV23-1A0A0A0MS06 115 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 K7N7A8 449 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 SLC33A1O00400 549 aaPredicted RBP14.23□□□□□ -0.13
GCFC2-202ENST00000409857 CCNOP22674 350 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 WNT5AP41221 380 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 RBP2P50120 134 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 CEBPGP53567 150 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 RPS23P62266 143 aaKnown RBP14.23□□□□□ -0.13
GCFC2-202ENST00000409857 IL13RA2Q14627 380 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 SPSB1Q96BD6 273 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 C10orf35Q96D05 121 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 C1QTNF5Q9BXJ0 243 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 ST3GAL6Q9Y274 331 aa14.23□□□□□ -0.13
GCFC2-202ENST00000409857 STRAPQ9Y3F4 350 aaKnown RBP14.23□□□□□ -0.13
GCFC2-202ENST00000409857 PMELP40967 661 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 RHEBQ15382 184 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 ZNF672Q499Z4 452 aaPredicted RBP14.22□□□□□ -0.13
GCFC2-202ENST00000409857 OR4D5Q8NGN0 318 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 APOBEC3DQ96AK3 386 aaPredicted RBP14.22□□□□□ -0.13
GCFC2-202ENST00000409857 ZNF442Q9H7R0 627 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 ZNF727A8MUV8 499 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 SMPD2O60906 423 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 GLRXP35754 106 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 OSR2Q8N2R0 312 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 EDARADDQ8WWZ3 215 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 PBDC1Q9BVG4 233 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 MAGT1Q9H0U3 335 aa14.22□□□□□ -0.13
GCFC2-202ENST00000409857 IGSF23A1L1A6 192 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 AP4M1O00189 453 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 PLAUP00749 431 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 SOHLH1Q5JUK2 328 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 SUMF2Q8NBJ7 301 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 MOB3AQ96BX8 217 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 ATP23Q9Y6H3 246 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 NXPH3O95157 252 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 OR2C1O95371 312 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 NRASP01111 189 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 FBP1P09467 338 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 RAB5CP51148 216 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 GNMTQ14749 295 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 OR2G3Q8NGZ4 309 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 TMEM171Q8WVE6 324 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 SYT3Q9BQG1 590 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 ZNF286AQ9HBT8 521 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 MMP24Q9Y5R2 645 aa14.21□□□□□ -0.13
GCFC2-202ENST00000409857 GATCO43716 136 aaKnown RBP14.2□□□□□ -0.14
GCFC2-202ENST00000409857 RD3LP0DJH9 198 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 ATP6V0CP27449 155 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 CNN3Q15417 329 aaKnown RBP14.2□□□□□ -0.14
GCFC2-202ENST00000409857 HAGHQ16775 308 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 OR2C3Q8N628 320 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 C3orf85A0A1B0GTC6 90 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 A0A1W2PPR1 153 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 PPIHO43447 177 aaKnown RBP14.2□□□□□ -0.14
GCFC2-202ENST00000409857 YIF1AO95070 293 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 HERV-K104P61576 105 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 YPEL4Q96NS1 127 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 OR51M1Q9H341 326 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 ABCA4P78363 2273 aa14.2□□□□□ -0.14
GCFC2-202ENST00000409857 PLCE1Q9P212 2302 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 E7EQL1 145 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 HS3ST1O14792 307 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 CXorf66Q5JRM2 361 aaPredicted RBP14.19□□□□□ -0.14
GCFC2-202ENST00000409857 ZNF787Q6DD87 383 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 SPSB3Q6PJ21 355 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 TCTEX1D2Q8WW35 142 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 MALSU1Q96EH3 234 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 CISD1Q9NZ45 108 aaKnown RBP14.19□□□□□ -0.14
GCFC2-202ENST00000409857 TMED3Q9Y3Q3 217 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 VSTM5A8MXK1 200 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 MPPED1O15442 326 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 SSSCA1O60232 199 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 NGFP01138 241 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 PPYP01298 95 aa14.19□□□□□ -0.14
GCFC2-202ENST00000409857 RPS10P46783 165 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms