RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 IGHV3-43DP0DP04 118 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 CEACAM6P40199 344 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 TSPAN5P62079 268 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 DYRK1AQ13627 763 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 MORN2Q502X0 79 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 C5orf24Q7Z6I8 188 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 TMEM17Q86X19 198 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 ABHD12Q8N2K0 398 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 OR52L2PQ8NGH6 319 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 NANPQ8TBE9 248 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 FAM216AQ8WUB2 273 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 TNFRSF14Q92956 283 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 TBX15Q96SF7 602 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 CLEC7AQ9BXN2 247 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 TOLLIPQ9H0E2 274 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 IGHV2-26A0A0B4J1V2 119 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 TOR1AO14656 332 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 PPP1CCP36873 323 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 RFX2P48378 723 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 PRRX1P54821 245 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 SCGB2A2Q13296 93 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 ARRDC1Q8N5I2 433 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 C8orf31Q8N9H6 132 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 OR10V1Q8NGI7 309 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 OR9G1Q8NH87 305 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 ZNF596Q8TC21 504 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 RDH8Q9NYR8 311 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 OR1A1Q9P1Q5 309 aa13.47□□□□□ -0.25
TSPAN4-208ENST00000409531 CENPXA8MT69 81 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 DISC1C4P0D8 188 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 M0QYG6 137 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 ITGB1BP1O14713 200 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 UPK1BO75841 260 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 RAB7AP51149 207 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 UBE2E1P51965 193 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 KLF9Q13886 244 aaPredicted RBP13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 GNMTQ14749 295 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 GPR157Q5UAW9 335 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 H1FOOQ8IZA3 346 aaPredicted RBP13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 PNKDQ8N490 385 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 OR2AK2Q8NG84 335 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 OR11H6Q8NGC7 330 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 OR6F1Q8NGZ6 308 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 GIMAP1Q8WWP7 306 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 LHX4Q969G2 390 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 BORCS5Q969J3 196 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 C7orf50Q9BRJ6 194 aaKnown RBP13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 ABCB10Q9NRK6 738 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 PSG11Q9UQ72 335 aa13.46□□□□□ -0.25
TSPAN4-208ENST00000409531 FAM172BPA6NC97 362 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 RNASEK-C17orf49H0YIS7 233 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 J3QR06 171 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 AMY2AP04746 511 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 NFYAP23511 347 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 COX7A1P24310 79 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 FCGR2CP31995 323 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 GNG10P50151 68 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 BPIFB3P59826 476 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 DHRS11Q6UWP2 260 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 LINC00311Q8N616 119 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 BEND2Q8NDZ0 799 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 OR4C16Q8NGL9 310 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 SPATA3Q8NHX4 192 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 CREB3L1Q96BA8 519 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 ABHD14AQ9BUJ0 271 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 TINAGL1Q9GZM7 467 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 GHITMQ9H3K2 345 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 OR2W1Q9Y3N9 320 aa13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 RBM7Q9Y580 266 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-208ENST00000409531 TRAV40A0A0B4J280 105 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 NAP1L6A6NFF2 107 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 TUSC2O75896 110 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 FSHBP01225 129 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 DLX1P56177 255 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 LGALS4P56470 323 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 HERV-K104P61576 105 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 KLRD1Q13241 179 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF626Q68DY1 528 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 C16orf87Q6PH81 154 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 LEAP2Q969E1 77 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 PRRT1Q99946 306 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF2Q9BSG1 426 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 MMP28Q9H239 520 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 OCEL1Q9H607 264 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 SCP2D1Q9UJQ7 156 aa13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 AMMECR1Q9Y4X0 333 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-208ENST00000409531 IGHV1-69DA0A0B4J2H0 117 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 CENPVL3A0A0U1RRI6 287 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 PPYP01298 95 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 IGLV1-47P01700 117 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 IGHV1-69P01742 117 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 IGHV3-7P01780 117 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 ARG1P05089 322 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 EPHA1P21709 976 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 IL3RAP26951 378 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 LUMP51884 338 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 HLA-DRB5Q30154 266 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms