RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PIGBOS1A0A0B4J2F0 54 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 A0A1B0GWA3 101 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 ANKUB1A6NFN9 424 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 ST8SIA3O43173 380 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 LATO43561 262 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 TNFSF15O95150 251 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SEMA4FO95754 770 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 CTSDP07339 412 aaPredicted RBP4.65□□□□□ -1.66
CLK1-202ENST00000409403 PFN1P07737 140 aaKnown RBP4.65□□□□□ -1.66
CLK1-202ENST00000409403 BCL2P10415 239 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SCGB1A1P11684 91 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 HMGA1P17096 107 aaKnown RBP4.65□□□□□ -1.66
CLK1-202ENST00000409403 FUT1P19526 365 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 EDN2P20800 178 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 GALR1P47211 349 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 FHITP49789 147 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 HNRNPA3P51991 378 aaKnown RBP4.65□□□□□ -1.66
CLK1-202ENST00000409403 CLDN18P56856 261 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SUPT4H1P63272 117 aaKnown RBP4.65□□□□□ -1.66
CLK1-202ENST00000409403 SRPXP78539 464 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 MRPS6P82932 125 aaKnown RBP4.65□□□□□ -1.66
CLK1-202ENST00000409403 KRTAP1-1Q07627 177 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 FOXF1Q12946 379 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 GPR18Q14330 331 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 WDR38Q5JTN6 314 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 LINC01590Q5TEZ4 76 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SPSB3Q6PJ21 355 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 PLXDC2Q6UX71 529 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 CYP2G1PQ6ZSU1 146 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SLC24A5Q71RS6 500 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 LHFPL1Q86WI0 220 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 C20orf196Q8IYI0 205 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 PNKDQ8N490 385 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SLC22A24Q8N4F4 322 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 TCTEX1D1Q8N7M0 179 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 TMEM116Q8NCL8 245 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 ZNF740Q8NDX6 193 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 OR6N2Q8NGY6 317 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 CMTM2Q8TAZ6 248 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 GRHL3Q8TE85 626 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 ERGIC1Q969X5 290 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 RASD2Q96D21 266 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SLC25A44Q96H78 314 aaPredicted RBP4.65□□□□□ -1.66
CLK1-202ENST00000409403 NMNAT3Q96T66 252 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 RNF2Q99496 336 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 TXN2Q99757 166 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SPIN2AQ99865 258 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 GABRG3Q99928 467 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 SPIN2BQ9BPZ2 258 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 PRSS22Q9GZN4 317 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 OR51I2Q9H344 312 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.65□□□□□ -1.66
CLK1-202ENST00000409403 SLC35D1Q9NTN3 355 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 TMEM106BQ9NUM4 274 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 CD84Q9UIB8 345 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 KCNE3Q9Y6H6 103 aa4.65□□□□□ -1.66
CLK1-202ENST00000409403 ANAPC1Q9H1A4 1944 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 IGHV2OR16-5A0A0B4J2B6 119 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OR6C6A6NF89 314 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LIPT2A6NK58 231 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 PAGE4O60829 102 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 KLF8O95600 359 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 IGHEP01854 428 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OR4Q2P0C623 313 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 NBEAP1P0C6P0 100 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ESDP10768 282 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ERGP11308 486 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 MMP9P14780 707 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ALOX5APP20292 161 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 HIST1H1TP22492 207 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 GRPRP30550 384 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 GNRHRP30968 328 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OTX1P32242 354 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 RAB38P57729 211 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CLDN2P57739 230 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 RPS4XP62701 263 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 BTG2P78543 158 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ZNF92Q03936 586 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 EIF3IQ13347 325 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 P2RY6Q15077 328 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 NSDHLQ15738 373 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ITPRIPL2Q3MIP1 535 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OCIAD2Q56VL3 154 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 DCST2Q5T1A1 773 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 PRR27Q6MZM9 219 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 TCF24Q7RTU0 167 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CENPVQ7Z7K6 275 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 MCEMP1Q8IX19 187 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 ZNF440Q8IYI8 595 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CMTM1Q8IZ96 169 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 LRRC25Q8N386 305 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 C10orf53Q8N6V4 93 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CDRT4Q8N9R6 151 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 BHLHE23Q8NDY6 225 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 OR2T10Q8NGZ9 312 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 DDB2Q92466 427 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 MRPL24Q96A35 216 aaKnown RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 RNF183Q96D59 192 aa4.64□□□□□ -1.67
CLK1-202ENST00000409403 CNRIP1Q96F85 164 aaPredicted RBP4.64□□□□□ -1.67
CLK1-202ENST00000409403 SDSLQ96GA7 329 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms