RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 OOSP1A8MZH6 123 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 J3QR06 171 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 BET1O15155 118 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 TXNL1O43396 289 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 RAB3DO95716 219 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 CD3DP04234 171 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 IFNA6P05013 189 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 IL3RAP26951 378 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 CEACAM3P40198 252 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 SURF2Q15527 256 aaPredicted RBP10.63□□□□□ -0.71
LIMS2-203ENST00000409254 BAK1Q16611 211 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 HLA-DRB5Q30154 266 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 IGSF11Q5DX21 431 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 FAHD2BQ6P2I3 314 aaPredicted RBP10.63□□□□□ -0.71
LIMS2-203ENST00000409254 ABHD12Q8N2K0 398 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 OR6F1Q8NGZ6 308 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 RFESDQ8TAC1 157 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 NANPQ8TBE9 248 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 MAFIPQ8WZ33 124 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 FAHD2AQ96GK7 314 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 PCGF1Q9BSM1 259 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 ABHD14AQ9BUJ0 271 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 MMP28Q9H239 520 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 SCP2D1Q9UJQ7 156 aa10.63□□□□□ -0.71
LIMS2-203ENST00000409254 IGHV1-69DA0A0B4J2H0 117 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 DISC1C4P0D8 188 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 RNASEK-C17orf49H0YIS7 233 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 LANCL1O43813 399 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 MMP23AO75900 390 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 PPYP01298 95 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 IGHV1-69P01742 117 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 FCER2P06734 321 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 OMGP23515 440 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 NFYBP25208 207 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 HLA-DMAP28067 261 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 UCP3P55916 312 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 MADCAM1Q13477 382 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 HCP5Q6MZN7 132 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 LPCAT3Q6P1A2 487 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 LHFPL1Q86WI0 220 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 OR4C16Q8NGL9 310 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 MOB3AQ96BX8 217 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 AGMATQ9BSE5 352 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 SIRT7Q9NRC8 400 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 RDH8Q9NYR8 311 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 PIPOXQ9P0Z9 390 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 CDC42EP3Q9UKI2 254 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 PSG11Q9UQ72 335 aa10.62□□□□□ -0.71
LIMS2-203ENST00000409254 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
LIMS2-203ENST00000409254 TRAV40A0A0B4J280 105 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 CENPVL3A0A0U1RRI6 287 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 TOR1AO14656 332 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 RAB29O14966 203 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 PPP1CCP36873 323 aaKnown RBP10.61□□□□□ -0.71
LIMS2-203ENST00000409254 CEACAM6P40199 344 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 ARHGDIBP52566 201 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 HERV-K104P61576 105 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 TSPAN5P62079 268 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 ASAH1Q13510 395 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 ZNF57Q68EA5 555 aaPredicted RBP10.61□□□□□ -0.71
LIMS2-203ENST00000409254 CCDC144NLQ6NUI1 221 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 ZNF782Q6ZMW2 699 aaPredicted RBP10.61□□□□□ -0.71
LIMS2-203ENST00000409254 ZBTB34Q8NCN2 500 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 OR4P4Q8NGL7 312 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 ZNF486Q96H40 463 aaPredicted RBP10.61□□□□□ -0.71
LIMS2-203ENST00000409254 OR1A1Q9P1Q5 309 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 COPZ2Q9P299 210 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 NUP50Q9UKX7 468 aa10.61□□□□□ -0.71
LIMS2-203ENST00000409254 ANK3Q12955 4377 aaKnown RBP10.61□□□□□ -0.71
LIMS2-203ENST00000409254 AMY2AP04746 511 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 HTR1DP28221 377 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 FCGR2CP31995 323 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 RFX2P48378 723 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 LUMP51884 338 aaPredicted RBP10.6□□□□□ -0.71
LIMS2-203ENST00000409254 DEFA1P59665 94 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 DEFA3P59666 94 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 GNMTQ14749 295 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 AANATQ16613 207 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 TUSC1Q2TAM9 212 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
LIMS2-203ENST00000409254 CT45A1Q5HYN5 189 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 CLEC9AQ6UXN8 241 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 C1orf229Q6ZS94 237 aaPredicted RBP10.6□□□□□ -0.71
LIMS2-203ENST00000409254 OR8H3Q8N146 312 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 PNKDQ8N490 385 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 ZNF645Q8N7E2 425 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 OR52L2PQ8NGH6 319 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 OR10V1Q8NGI7 309 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 OR10X1Q8NGY0 326 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 TERB2Q8NHR7 220 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 CT45A3Q8NHU0 189 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 LHX4Q969G2 390 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 MALSU1Q96EH3 234 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 SCGB3A2Q96PL1 93 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 SLC25A21Q9BQT8 299 aaPredicted RBP10.6□□□□□ -0.71
LIMS2-203ENST00000409254 IFI27L2Q9H2X8 130 aa10.6□□□□□ -0.71
LIMS2-203ENST00000409254 C2CD3Q4AC94 2353 aa10.59□□□□□ -0.71
LIMS2-203ENST00000409254 MEX3AA1L020 520 aaKnown RBP10.59□□□□□ -0.71
LIMS2-203ENST00000409254 LEUTXA8MZ59 168 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms