RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 FUT9Q9Y231 359 aa13.51□□□□□ -0.25
CCDC85A-201ENST00000407595 IGSF23A1L1A6 192 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 PDLIM3Q53GG5 364 aaPredicted RBP13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 TPRX1Q8N7U7 411 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 IGHV3-43A0A0B4J1X8 118 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 PIGBOS1A0A0B4J2F0 54 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 IGHV3-43DP0DP04 118 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 BSXQ3C1V8 233 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 ATP5SQ99766 215 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 OPN1MWP04001 364 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 SCTP09683 121 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 OPN1MW2P0DN77 364 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 OPN1MW3P0DN78 364 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 DTYMKP23919 212 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 MSMO1Q15800 293 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 SIRT7Q9NRC8 400 aa13.5□□□□□ -0.25
CCDC85A-201ENST00000407595 NCOA6Q14686 2063 aaPredicted RBP13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 IGHMP01871 453 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 MPZP25189 248 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 HOXA6P31267 233 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 ZNF718Q3SXZ3 478 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 OR10V1Q8NGI7 309 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 Q96M66 194 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 GINS3Q9BRX5 216 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 ZNF552Q9H707 407 aaPredicted RBP13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 KLF2Q9Y5W3 355 aaPredicted RBP13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 TGOLN2O43493 480 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 CTXN2P0C2S0 81 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 FOLR2P14207 255 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 GNG3P63215 75 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 IL24Q13007 206 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 LOXL4Q96JB6 756 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 TUBA4BQ9H853 241 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 SERTAD4Q9NUC0 356 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 ATP23Q9Y6H3 246 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 MDFIC2A0A1B0GVS7 189 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 A0A1W2PNV4 684 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 CST2P09228 141 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 BCL3P20749 454 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 HTD2P86397 168 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 SPINK9Q5DT21 86 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 BOD1Q96IK1 185 aa13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 NUDT16L1Q9BRJ7 211 aaKnown RBP13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 RALYQ9UKM9 306 aaKnown RBP13.49□□□□□ -0.25
CCDC85A-201ENST00000407595 PPP1CBP62140 327 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 QRFPP83859 136 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 LHFPL1Q86WI0 220 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 IL22RA2Q969J5 263 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 PITPNC1Q9UKF7 332 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 PTPN13Q12923 2485 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 CDX4O14627 284 aaPredicted RBP13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 CXCL1P09341 107 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 RPS2P15880 293 aaKnown RBP13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 ZNF816Q0VGE8 651 aaPredicted RBP13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 C21orf62-AS1Q17RA5 79 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 FBXW9Q5XUX1 488 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 PPP1R35Q8TAP8 253 aa13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 OPN3Q9H1Y3 402 aaPredicted RBP13.48□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BKO60814 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BJP06899 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 ZNF17P17021 662 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BOP23527 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BBP33778 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 PTGDSP41222 190 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 NPBWR2P48146 333 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BDP58876 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BCP62807 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST2H2BEQ16778 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 ZNF826PQ6ZT77 177 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 FGFBP3Q8TAT2 258 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BHQ93079 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BNQ99877 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HIST1H2BMQ99879 126 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 ZNF581Q9P0T4 197 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 DVL1O14640 695 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 SYNGR2O43760 224 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 PITX3O75364 302 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 PNRC1Q12796 327 aaPredicted RBP13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HEPN1Q6WQI6 88 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 SLC25A40Q8TBP6 338 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 TMEM222Q9H0R3 208 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 WDFY4Q6ZS81 3184 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 LOC102723996A0A087X1L8 192 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 A0A0U1RQV5 110 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 HSPB1P04792 205 aaKnown RBP13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 TNFSF4P23510 183 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 FAM58AQ8N1B3 248 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 FAM103A1Q9BTL3 118 aaKnown RBP13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 TUBD1Q9UJT1 453 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 V9GYS6 101 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 OR10P1Q8NGE3 313 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 RAB40CQ96S21 281 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 WNT5BQ9H1J7 359 aa13.47□□□□□ -0.25
CCDC85A-201ENST00000407595 SPEGQ15772 3267 aa13.46□□□□□ -0.25
CCDC85A-201ENST00000407595 BCL2P10415 239 aa13.46□□□□□ -0.25
CCDC85A-201ENST00000407595 PSG2P11465 335 aa13.46□□□□□ -0.25
CCDC85A-201ENST00000407595 GLIPR1P48060 266 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms