RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 FOXB2Q5VYV0 432 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 THSD4Q6ZMP0 1018 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 PTX4Q96A99 478 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 SLC52A3Q9NQ40 469 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 SOCS1O15524 211 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 TMEM78Q5T7P6 136 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 SH2D5Q6ZV89 423 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 IL17BQ9UHF5 180 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 HYAL3O43820 417 aaPredicted RBP10.55□□□□□ -0.72
SMCR8-201ENST00000406438 WNT5AP41221 380 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 XAF1Q6GPH4 301 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 ABHD1Q96SE0 405 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 RPP25Q9BUL9 199 aaKnown RBP10.55□□□□□ -0.72
SMCR8-201ENST00000406438 PNLIPP16233 465 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 GUCA2BQ16661 112 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 CALHM1Q8IU99 346 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 STPG3Q8N7X2 389 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 LRRC75AQ8NAA5 344 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 ZNF714Q96N38 554 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 TMEM218A2RU14 115 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 LDLRAD3Q86YD5 345 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 OR2J1Q9GZK6 312 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 TINAGQ9UJW2 476 aa10.55□□□□□ -0.72
SMCR8-201ENST00000406438 SNURFLB1AK76 121 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 NMUP48645 174 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 FBXW9Q5XUX1 488 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 MRPS16Q9Y3D3 137 aaKnown RBP10.54□□□□□ -0.72
SMCR8-201ENST00000406438 PAM16Q9Y3D7 125 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 CA11O75493 328 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 OR10J1P30954 320 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 SEZ6L2Q6UXD5 910 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 WDR54Q9H977 334 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 IL19Q9UHD0 177 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 CDC42EP2O14613 210 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 PITX3O75364 302 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 COL10A1Q03692 680 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 LRRC75BQ2VPJ9 315 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 AWAT1Q58HT5 328 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 IER3P46695 156 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 MRPL54Q6P161 138 aaKnown RBP10.54□□□□□ -0.72
SMCR8-201ENST00000406438 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 H7C2G1 150 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 MPDU1O75352 247 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 TMEM50BP56557 158 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 DDB2Q92466 427 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 LIFP15018 202 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 DRD3P35462 400 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 PGLYRP3Q96LB9 341 aa10.54□□□□□ -0.72
SMCR8-201ENST00000406438 TMPRSS3P57727 454 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 LGALSLQ3ZCW2 172 aaPredicted RBP10.53□□□□□ -0.72
SMCR8-201ENST00000406438 LAMTOR1Q6IAA8 161 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ZNF385DQ9H6B1 395 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 FAM60AQ9NP50 221 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 NUDT3O95989 172 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 RPLP1P05386 114 aaKnown RBP10.53□□□□□ -0.72
SMCR8-201ENST00000406438 PF4V1P10720 104 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 MEOX2P50222 304 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 OR1K1Q8NGR3 316 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 CHST5Q9GZS9 411 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 GPR35Q9HC97 309 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
SMCR8-201ENST00000406438 CLEC18BQ6UXF7 455 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ZNF738Q8NE65 137 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 RAB33BQ9H082 229 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 CEACAM18A8MTB9 384 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 MAS1LP35410 378 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 HMGA2P52926 109 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 GGTLC2Q14390 218 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 PRSS8Q16651 343 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ATG4DQ86TL0 474 aaPredicted RBP10.53□□□□□ -0.72
SMCR8-201ENST00000406438 SGK494Q96LW2 274 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 PIMREGQ9BSJ6 248 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ADAP1O75689 374 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 HOXA6P31267 233 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 SRSF5Q13243 272 aaKnown RBP10.53□□□□□ -0.72
SMCR8-201ENST00000406438 VN1R17PQ8TDU5 208 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 IGHV3OR16-12A0A075B7B8 117 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 FFAR1O14842 300 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 PSG2P11465 335 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 PRSS12P56730 875 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 SHISA5Q8N114 240 aa10.53□□□□□ -0.72
SMCR8-201ENST00000406438 ADRA2AP08913 450 aa10.52□□□□□ -0.72
SMCR8-201ENST00000406438 TFF2Q03403 129 aa10.52□□□□□ -0.72
SMCR8-201ENST00000406438 KLF9Q13886 244 aaPredicted RBP10.52□□□□□ -0.72
SMCR8-201ENST00000406438 EAF1Q96JC9 268 aaPredicted RBP10.52□□□□□ -0.72
SMCR8-201ENST00000406438 GPA33Q99795 319 aa10.52□□□□□ -0.72
SMCR8-201ENST00000406438 PEX11BO96011 259 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 MESTQ5EB52 335 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 ADAD2Q8NCV1 583 aaKnown RBP10.52□□□□□ -0.73
SMCR8-201ENST00000406438 ABHD14BQ96IU4 210 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 HAX1O00165 279 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 OGG1O15527 345 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 HYPMO75409 117 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
SMCR8-201ENST00000406438 REG1BP48304 166 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 NEURL2Q9BR09 285 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms