RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 VDAC1P21796 283 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 MRPL54Q6P161 138 aaKnown RBP12.1□□□□□ -0.47
DUSP28-202ENST00000405954 DOK3Q7L591 496 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 MMABQ96EY8 250 aaPredicted RBP12.1□□□□□ -0.47
DUSP28-202ENST00000405954 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 HRASLS2Q9NWW9 162 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 THAP10Q9P2Z0 257 aaPredicted RBP12.1□□□□□ -0.47
DUSP28-202ENST00000405954 MYO7BQ6PIF6 2116 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 ADH5P11766 374 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 FOXF1Q12946 379 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 ZNF141Q15928 474 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 OR2M3Q8NG83 312 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 COL4A3Q01955 1670 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 PLXNA2O75051 1894 aa12.1□□□□□ -0.47
DUSP28-202ENST00000405954 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 TMEM250H0YL14 139 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 M0R2Z0 102 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 CTSBP07858 339 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 COX5AP20674 150 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 CFPP27918 469 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 ZC2HC1AQ96GY0 325 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 UHRF2Q96PU4 802 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 H0YIG0 161 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 CORTO00230 105 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 PPYP01298 95 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 NANOS1Q8WY41 292 aaKnown RBP12.09□□□□□ -0.47
DUSP28-202ENST00000405954 ZNF775Q96BV0 537 aaPredicted RBP12.09□□□□□ -0.47
DUSP28-202ENST00000405954 CACNG5Q9UF02 275 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 IGHV1-69-2A0A0G2JMI3 117 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 F2Z2F3 143 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 ERGP11308 486 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 P2RY2P41231 377 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 FUT6P51993 359 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 QRFPP83859 136 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 ZFP36L1Q07352 338 aaKnown RBP12.09□□□□□ -0.47
DUSP28-202ENST00000405954 RAET1LQ5VY80 246 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 TMEM234Q8WY98 164 aa12.09□□□□□ -0.47
DUSP28-202ENST00000405954 NAA38Q9BRA0 125 aaKnown RBP12.09□□□□□ -0.47
DUSP28-202ENST00000405954 A0A1W2PP55 124 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 PIAS2O75928 621 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 SLC38A11Q08AI6 406 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 OR8I2Q8N0Y5 310 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 GAPTQ8N292 157 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 LRRC75AQ8NAA5 344 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.48
DUSP28-202ENST00000405954 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
DUSP28-202ENST00000405954 EML2O95834 649 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 DEFA4P12838 97 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF17P17021 662 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 SRIP30626 198 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 PLCXD2Q0VAA5 305 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 GPM6BQ13491 265 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 FHL5Q5TD97 284 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 C7orf61Q8IZ16 206 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 CCL4L1Q8NHW4 92 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 PYGO2Q9BRQ0 406 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 CDC42EP3Q9UKI2 254 aa12.08□□□□□ -0.48
DUSP28-202ENST00000405954 A0A0U1RQV5 110 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 PPOXP50336 477 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 SERF2P84101 59 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF658BQ4V348 819 aaPredicted RBP12.07□□□□□ -0.48
DUSP28-202ENST00000405954 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 SFRP2Q96HF1 295 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 TMEM222Q9H0R3 208 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 LYRM4Q9HD34 91 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 H0Y8X5 98 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 MT-ATP6P00846 226 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 C3orf79P0CE67 100 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 EIF3IQ13347 325 aaKnown RBP12.07□□□□□ -0.48
DUSP28-202ENST00000405954 KIAA0895LQ68EN5 471 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 OR5AS1Q8N127 324 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 RNF133Q8WVZ7 376 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 C18orf12Q96KH6 178 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 OR2A5Q96R48 311 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 RAB40CQ96S21 281 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 EDDM13A0A1B0GTR0 161 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 DPTQ07507 201 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF77Q15935 545 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 PMCHL1Q16048 86 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF841Q6ZN19 808 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 DERL1Q9BUN8 251 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
DUSP28-202ENST00000405954 SNAI2O43623 268 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 S1PR2O95136 353 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 CTXN2P0C2S0 81 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 RAB37Q96AX2 223 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 NUDT16L1Q9BRJ7 211 aaKnown RBP12.06□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF331Q9NQX6 463 aaPredicted RBP12.06□□□□□ -0.48
DUSP28-202ENST00000405954 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 SYNGR2O43760 224 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 PEBP1P30086 187 aaKnown RBP12.06□□□□□ -0.48
DUSP28-202ENST00000405954 VSTM2LQ96N03 204 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 FAM60AQ9NP50 221 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 FAM206AQ9NX38 181 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 PLEK2Q9NYT0 353 aa12.06□□□□□ -0.48
DUSP28-202ENST00000405954 ZNF581Q9P0T4 197 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms