RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 OR10V1Q8NGI7 309 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 OR6F1Q8NGZ6 308 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 LHX4Q969G2 390 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 TINAGL1Q9GZM7 467 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-201ENST00000404210 C11orf54Q9H0W9 315 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-201ENST00000404210 GHITMQ9H3K2 345 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 RDH8Q9NYR8 311 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF69Q9UC07 566 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF469Q96JG9 3925 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-201ENST00000404210 FAM172BPA6NC97 362 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 DISC1C4P0D8 188 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 M0QYG6 137 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 UPK1BO75841 260 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF735P0CB33 412 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 NFYAP23511 347 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-201ENST00000404210 FAUP35544 74 aaKnown RBP10.03□□□□□ -0.8
LINC00339-201ENST00000404210 RAB7AP51149 207 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 CT45A1Q5HYN5 189 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 GPR157Q5UAW9 335 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF626Q68DY1 528 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF660Q6AZW8 331 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-201ENST00000404210 CLEC9AQ6UXN8 241 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
LINC00339-201ENST00000404210 ARRDC1Q8N5I2 433 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 OR4C16Q8NGL9 310 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 CT45A3Q8NHU0 189 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 LEAP2Q969E1 77 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 SLC6A7Q99884 636 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 SMR3AQ99954 134 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 C7orf50Q9BRJ6 194 aaKnown RBP10.03□□□□□ -0.8
LINC00339-201ENST00000404210 HRASLSQ9HDD0 168 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 GAB2Q9UQC2 676 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 OR2W1Q9Y3N9 320 aa10.03□□□□□ -0.8
LINC00339-201ENST00000404210 IGHV1-69DA0A0B4J2H0 117 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 NAP1L6A6NFF2 107 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 CENPXA8MT69 81 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 FSHBP01225 129 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 IGHV1-69P01742 117 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 IGHV3-7P01780 117 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 ARG1P05089 322 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 COX7A1P24310 79 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 GNG10P50151 68 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-201ENST00000404210 LGALS4P56470 323 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 PRB3Q04118 309 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-201ENST00000404210 KLRD1Q13241 179 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 HLA-DRB5Q30154 266 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 MIDNQ504T8 468 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 KLF17Q5JT82 389 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-201ENST00000404210 OR2AK2Q8NG84 335 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 OR4D10Q8NGI6 311 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 BORCS5Q969J3 196 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 CREB3L1Q96BA8 519 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 ZNF2Q9BSG1 426 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-201ENST00000404210 MMP28Q9H239 520 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 TBL2Q9Y4P3 447 aaKnown RBP10.02□□□□□ -0.81
LINC00339-201ENST00000404210 CREBBPQ92793 2442 aa10.02□□□□□ -0.81
LINC00339-201ENST00000404210 TRAV40A0A0B4J280 105 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 A0A1W2PPE3 182 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 BUB1B-PAK6H3BSN5 160 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 SLC31A2O15432 143 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 PLA2G10O15496 165 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 SLC22A5O76082 557 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 PPYP01298 95 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 AMY2AP04746 511 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 OR8U9P0C7N5 309 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 AADACP22760 399 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 UCP3P55916 312 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 IFITM3Q01628 133 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 MINOS1Q5TGZ0 78 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 LHFPL1Q86WI0 220 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 PDZD9Q8IXQ8 264 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 OR8U1Q8NH10 309 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 OR56B4Q8NH76 319 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 TERB2Q8NHR7 220 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 PRRT1Q99946 306 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 ABHD14AQ9BUJ0 271 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 PARP12Q9H0J9 701 aaKnown RBP10.01□□□□□ -0.81
LINC00339-201ENST00000404210 SLC2A8Q9NY64 477 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 PIPOXQ9P0Z9 390 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 DPM3Q9P2X0 92 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 SCP2D1Q9UJQ7 156 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 NUP50Q9UKX7 468 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 AMMECR1Q9Y4X0 333 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-201ENST00000404210 RBM7Q9Y580 266 aaKnown RBP10.01□□□□□ -0.81
LINC00339-201ENST00000404210 MINOS1-NBL1R4GNA1 71 aa10.01□□□□□ -0.81
LINC00339-201ENST00000404210 LEUTXA8MZ59 168 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 LY6LH3BQJ8 138 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 RAB29O14966 203 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 NPFFO15130 113 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 ST8SIA5O15466 376 aa10□□□□□ -0.81
LINC00339-201ENST00000404210 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms