RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 LINC00299Q6ZSB3 139 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 SLC25A48Q6ZT89 311 aaKnown RBP12.93□□□□□ -0.34
HMGA1-204ENST00000401473 MFSD4AQ8N468 514 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 BEND2Q8NDZ0 799 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 OR10J5Q8NHC4 309 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 ZNF596Q8TC21 504 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 SDHCQ99643 169 aaPredicted RBP12.93□□□□□ -0.34
HMGA1-204ENST00000401473 SRRQ9GZT4 340 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 TOLLIPQ9H0E2 274 aa12.93□□□□□ -0.34
HMGA1-204ENST00000401473 BUB1B-PAK6H3BSN5 160 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 SRD5A1P18405 259 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 EPHA1P21709 976 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 PTBP1P26599 531 aaKnown RBP eCLIP12.92□□□□□ -0.34
HMGA1-204ENST00000401473 BPIFB3P59826 476 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 DIAPH2-AS1Q14236 149 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 TUSC1Q2TAM9 212 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 MIDNQ504T8 468 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 C9orf139Q6ZV77 190 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 LDLRAD3Q86YD5 345 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 DYNAPQ8N1N2 210 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 Q8N402 240 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 TEX29Q8N6K0 151 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 THAP7Q9BT49 309 aaPredicted RBP12.92□□□□□ -0.34
HMGA1-204ENST00000401473 MS4A7Q9GZW8 240 aaPredicted RBP12.92□□□□□ -0.34
HMGA1-204ENST00000401473 MMP28Q9H239 520 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 AKIP1Q9NQ31 210 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 RDH8Q9NYR8 311 aa12.92□□□□□ -0.34
HMGA1-204ENST00000401473 LY6LH3BQJ8 138 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 TOR1AO14656 332 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 DIRAS3O95661 229 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 PMP2P02689 132 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 NFYAP23511 347 aaPredicted RBP12.91□□□□□ -0.34
HMGA1-204ENST00000401473 HRH1P35367 487 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 PRRX1P54821 245 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 ARPC4P59998 168 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 Q3ZCU0 254 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 LY6G6FQ5SQ64 297 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 OVCH2Q7RTZ1 564 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 LINC00311Q8N616 119 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 C8orf31Q8N9H6 132 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 ZNF48Q96MX3 618 aaPredicted RBP12.91□□□□□ -0.34
HMGA1-204ENST00000401473 C11orf54Q9H0W9 315 aaPredicted RBP12.91□□□□□ -0.34
HMGA1-204ENST00000401473 MDFIC2A0A1B0GVS7 189 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 CD3DP04234 171 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 CTXN2P0C2S0 81 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 FAM157CP0CG43 387 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 HTR1DP28221 377 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 RCVRNP35243 200 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 LGALS4P56470 323 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 BAK1Q16611 211 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 ODF3L1Q8IXM7 274 aa12.91□□□□□ -0.34
HMGA1-204ENST00000401473 H1FOOQ8IZA3 346 aaPredicted RBP12.91□□□□□ -0.34
HMGA1-204ENST00000401473 J3QRK9 145 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 ST8SIA5O15466 376 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 OR5H8P0DN80 308 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 ZNF45Q02386 682 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 CDK10Q15131 360 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 SSX2Q16385 188 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 DEFB112Q30KQ8 113 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 ZNF660Q6AZW8 331 aaPredicted RBP12.9□□□□□ -0.34
HMGA1-204ENST00000401473 OR2AK2Q8NG84 335 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 OR4D10Q8NGI6 311 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 TRIM63Q969Q1 353 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 ST6GALNAC6Q969X2 333 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 GINS4Q9BRT9 223 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 ABHD14AQ9BUJ0 271 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 NECAP2Q9NVZ3 263 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 DPM3Q9P2X0 92 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 RNF150Q9ULK6 438 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 HILPDAQ9Y5L2 63 aa12.9□□□□□ -0.34
HMGA1-204ENST00000401473 M0QYG6 137 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 PROP1O75360 226 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 RGS11O94810 467 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 ACTBP60709 375 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 ACTG1P63261 375 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 DHRS11Q6UWP2 260 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 OR10X1Q8NGY0 326 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 ABHD14BQ96IU4 210 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
HMGA1-204ENST00000401473 IFI27L2Q9H2X8 130 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 TBL2Q9Y4P3 447 aaKnown RBP12.89□□□□□ -0.35
HMGA1-204ENST00000401473 ZNF736B4DX44 427 aaPredicted RBP12.89□□□□□ -0.35
HMGA1-204ENST00000401473 TUSC2O75896 110 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 OR8U9P0C7N5 309 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 FCGR2CP31995 323 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 OR3A3P47888 321 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 SSBP1Q04837 148 aaKnown RBP12.89□□□□□ -0.35
HMGA1-204ENST00000401473 DYRK1AQ13627 763 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 OR5H2Q8NGV7 314 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 OR8U1Q8NH10 309 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 MALSU1Q96EH3 234 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 SLC6A7Q99884 636 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 EHFQ9NZC4 300 aa12.89□□□□□ -0.35
HMGA1-204ENST00000401473 FBN1P35555 2871 aaKnown RBP12.88□□□□□ -0.35
HMGA1-204ENST00000401473 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 TAS2R46P59540 309 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 MINOS1Q5TGZ0 78 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 LYG1Q8N1E2 194 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 GDPD1Q8N9F7 314 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms