RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 SWI5Q1ZZU3 235 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 ZNF585BQ52M93 769 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 FAM180AQ6UWF9 173 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 ODF3L1Q8IXM7 274 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 ZNF645Q8N7E2 425 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 OR8U1Q8NH10 309 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 LRRC29Q8WV35 223 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 MUCL1Q96DR8 90 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 LURAP1Q96LR2 239 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 TSNAXQ99598 290 aaKnown RBP13.2□□□□□ -0.3
CDC42-203ENST00000400259 UQCC1Q9NVA1 299 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 KCNS2Q9ULS6 477 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 RBM7Q9Y580 266 aaKnown RBP13.2□□□□□ -0.3
CDC42-203ENST00000400259 CEP250Q9BV73 2442 aa13.2□□□□□ -0.3
CDC42-203ENST00000400259 ZFHX2Q9C0A1 2572 aaPredicted RBP13.2□□□□□ -0.3
CDC42-203ENST00000400259 SRRM5B3KS81 715 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 M0R1B8 84 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 CRYAAP02489 173 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 PAX9P55771 341 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 OR2Z1Q8NG97 314 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 STRAPQ9Y3F4 350 aaKnown RBP13.19□□□□□ -0.3
CDC42-203ENST00000400259 AGPAT2O15120 278 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 SNAPINO95295 136 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 HBZP02008 142 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 MUC1P15941 1255 aaPredicted RBP13.19□□□□□ -0.3
CDC42-203ENST00000400259 HOXA4Q00056 320 aaPredicted RBP13.19□□□□□ -0.3
CDC42-203ENST00000400259 EIF4EBP1Q13541 118 aaPredicted RBP13.19□□□□□ -0.3
CDC42-203ENST00000400259 TRAT1Q6PIZ9 186 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 SVBPQ8N300 66 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 COMMD1Q8N668 190 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 RAB40CQ96S21 281 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 SEC11CQ9BY50 192 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 SAV1Q9H4B6 383 aaPredicted RBP13.19□□□□□ -0.3
CDC42-203ENST00000400259 LUZP4Q9P127 313 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 AKAP13Q12802 2813 aa13.19□□□□□ -0.3
CDC42-203ENST00000400259 IGLV3-9A0A075B6K5 115 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 WRBO00258 174 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 CHST1O43916 411 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 IGKV1-5P01602 117 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 CD5P06127 495 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 IL2RGP31785 369 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 SSTP61278 116 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 KRBOX4Q5JUW0 171 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 LRP11Q86VZ4 500 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 CD177Q8N6Q3 437 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 TREM1Q9NP99 234 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 A8MXE2 369 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 C9JQL5 133 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 ZNF737O75373 536 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 GABRA2P47869 451 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 ASCL1P50553 236 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 KLF3P57682 345 aaPredicted RBP13.18□□□□□ -0.3
CDC42-203ENST00000400259 Q6ZRM9 215 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 ASCL5Q7RTU5 278 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 SH3BGRL3Q9H299 93 aa13.18□□□□□ -0.3
CDC42-203ENST00000400259 EGR1P18146 543 aa13.17□□□□□ -0.3
CDC42-203ENST00000400259 EPHA1P21709 976 aa13.17□□□□□ -0.3
CDC42-203ENST00000400259 PRDX2P32119 198 aa13.17□□□□□ -0.3
CDC42-203ENST00000400259 TDGF1P3P51864 188 aa13.17□□□□□ -0.3
CDC42-203ENST00000400259 ZNF295-AS1Q8N0V1 137 aa13.17□□□□□ -0.3
CDC42-203ENST00000400259 HSD17B11Q8NBQ5 300 aa13.17□□□□□ -0.3
CDC42-203ENST00000400259 DUSP13Q9UII6 198 aa13.17□□□□□ -0.3
CDC42-203ENST00000400259 RNASEK-C17orf49H0YIS7 233 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 GLIPR1P48060 266 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 CBLN2Q8IUK8 224 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 CLRN3Q8NCR9 226 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 OR5C1Q8NGR4 320 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 RNASE11Q8TAA1 199 aaKnown RBP13.16□□□□□ -0.3
CDC42-203ENST00000400259 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 CACNG5Q9UF02 275 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 WSB1Q9Y6I7 421 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 K7N7A8 449 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 TFF1P04155 84 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 NPBWR1P48145 328 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 FHITP49789 147 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 DVL1P1P54792 670 aaPredicted RBP13.16□□□□□ -0.3
CDC42-203ENST00000400259 RPS23P62266 143 aaKnown RBP13.16□□□□□ -0.3
CDC42-203ENST00000400259 CLINT1Q14677 625 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 OR13A1Q8NGR1 328 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 NINJ1Q92982 152 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 COA4Q9NYJ1 87 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 CACNA1DQ01668 2161 aa13.16□□□□□ -0.3
CDC42-203ENST00000400259 CADP27708 2225 aa13.15□□□□□ -0.3
CDC42-203ENST00000400259 IGKV1D-17A0A075B6S4 117 aa13.15□□□□□ -0.3
CDC42-203ENST00000400259 FAM157AC9JC47 383 aa13.15□□□□□ -0.3
CDC42-203ENST00000400259 TXNL1O43396 289 aa13.15□□□□□ -0.3
CDC42-203ENST00000400259 CAMLGP49069 296 aa13.15□□□□□ -0.3
CDC42-203ENST00000400259 DYNLT3P51808 116 aa13.15□□□□□ -0.3
CDC42-203ENST00000400259 RPL23AP62750 156 aaKnown RBP13.15□□□□□ -0.3
CDC42-203ENST00000400259 HTD2P86397 168 aa13.15□□□□□ -0.3
CDC42-203ENST00000400259 GCSAMQ8N6F7 178 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms