RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 HES4Q9HCC6 221 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 C1orf123Q9NWV4 160 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 HRNRQ86YZ3 2850 aaPredicted RBP12.75□□□□□ -0.37
COL25A1-201ENST00000399126 IGKV1-6A0A0C4DH72 117 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 ADAM20O43506 726 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 GRNP28799 593 aaKnown RBP12.75□□□□□ -0.37
COL25A1-201ENST00000399126 S100A11P31949 105 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 CA7P43166 264 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 TMEM128Q5BJH2 165 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 UBALD1Q8TB05 177 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 MITD1Q8WV92 249 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 MFFQ9GZY8 342 aa12.75□□□□□ -0.37
COL25A1-201ENST00000399126 PSPNO60542 156 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 ZNF146Q15072 292 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 DHRS11Q6UWP2 260 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 Q8IYB0 196 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 TMEM185AQ8NFB2 350 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 SEC22AQ96IW7 307 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 OR2V2Q96R30 315 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 FAM90A27PA6NNH2 459 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 CCL21O00585 134 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 EGR1P18146 543 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 DDTP30046 118 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 ADAM5Q6NVV9 412 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 FAHD2BQ6P2I3 314 aaPredicted RBP12.74□□□□□ -0.37
COL25A1-201ENST00000399126 TMEM108Q6UXF1 575 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 ST6GALNAC3Q8NDV1 305 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 FAHD2AQ96GK7 314 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 TMEM140Q9NV12 185 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
COL25A1-201ENST00000399126 NKX2-6A6NCS4 301 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 HAND1O96004 215 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 AADACP22760 399 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 SEC61A1P61619 476 aaKnown RBP12.73□□□□□ -0.37
COL25A1-201ENST00000399126 BEX5Q5H9J7 111 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 PCSK4Q6UW60 755 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 C1orf174Q8IYL3 243 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 TOLLIPQ9H0E2 274 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
COL25A1-201ENST00000399126 TAS2R31P59538 309 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 ACP7Q6ZNF0 438 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 BOLLQ8N9W6 283 aaKnown RBP12.73□□□□□ -0.37
COL25A1-201ENST00000399126 OR5M8Q8NGP6 311 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 LRRC29Q8WV35 223 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 PHB2Q99623 299 aa12.73□□□□□ -0.37
COL25A1-201ENST00000399126 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 DSCAMO60469 2012 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 TMEM218A2RU14 115 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 SFT2D2O95562 160 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 RAP2BP61225 183 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 PEA15Q15121 130 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 SHISA2Q6UWI4 295 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 GSG1LQ6UXU4 331 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 ZNF561Q8N587 486 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 USP24Q9UPU5 2620 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.72□□□□□ -0.37
COL25A1-201ENST00000399126 ADAP1O75689 374 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 IGHV2-5P01817 119 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 PHLDA2Q53GA4 152 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 MOGAT3Q86VF5 341 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 ZCCHC24Q8N2G6 241 aaKnown RBP12.72□□□□□ -0.37
COL25A1-201ENST00000399126 OR11L1Q8NGX0 322 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 ITLN1Q8WWA0 313 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
COL25A1-201ENST00000399126 SH2D1BO14796 132 aa12.71□□□□□ -0.37
COL25A1-201ENST00000399126 ZNF728P0DKX0 622 aa12.71□□□□□ -0.37
COL25A1-201ENST00000399126 CD200P41217 278 aa12.71□□□□□ -0.37
COL25A1-201ENST00000399126 FAM201AQ5SY85 155 aa12.71□□□□□ -0.37
COL25A1-201ENST00000399126 TMUB2Q71RG4 321 aa12.71□□□□□ -0.37
COL25A1-201ENST00000399126 TGIF2LYQ8IUE0 185 aa12.71□□□□□ -0.37
COL25A1-201ENST00000399126 GPHA2Q96T91 129 aa12.71□□□□□ -0.37
COL25A1-201ENST00000399126 C14orf166Q9Y224 244 aaKnown RBP12.71□□□□□ -0.37
COL25A1-201ENST00000399126 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 CXorf65A6NEN9 183 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 TRDCB7Z8K6 153 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 OR8U8P0C7N1 319 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 HNF1AP20823 631 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 PIGPP57054 158 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 SORDQ00796 357 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 NHLH2Q02577 135 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 RBM39Q14498 530 aaKnown RBP12.71□□□□□ -0.38
COL25A1-201ENST00000399126 SURF2Q15527 256 aaPredicted RBP12.71□□□□□ -0.38
COL25A1-201ENST00000399126 LRRC37A5PQ49AS3 106 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 SPIN3Q5JUX0 258 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 Q6ZS49 121 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 NEUROG1Q92886 237 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 MRPL24Q96A35 216 aaKnown RBP12.71□□□□□ -0.38
COL25A1-201ENST00000399126 SCGB3A2Q96PL1 93 aa12.71□□□□□ -0.38
COL25A1-201ENST00000399126 CITED2Q99967 270 aaPredicted RBP12.71□□□□□ -0.38
COL25A1-201ENST00000399126 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 PPIHO43447 177 aaKnown RBP12.7□□□□□ -0.38
COL25A1-201ENST00000399126 PPYP01298 95 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 CTSDP07339 412 aaPredicted RBP12.7□□□□□ -0.38
COL25A1-201ENST00000399126 GLP1RP43220 463 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 PPT1P50897 306 aa12.7□□□□□ -0.38
COL25A1-201ENST00000399126 RAB5CP51148 216 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms