RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 GUCD1Q96NT3 240 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ST6GALNAC2Q9UJ37 374 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 TRAV34A0A0B4J273 112 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ZNF716A6NP11 495 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 CLDN34H7C241 214 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 HAX1O00165 279 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 BMPR1BO00238 502 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ORM1P02763 201 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ERGP11308 486 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 TNCP24821 2201 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 TUSC1Q2TAM9 212 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 SLC25A53Q5H9E4 307 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ADIPOR1Q96A54 375 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 WDR61Q9GZS3 305 aaKnown RBP9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ASCL3Q9NQ33 180 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ANKRD36A6QL64 1941 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ERVH48-1M5A8F1 160 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 FAM157CP0CG43 387 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 HLA-GP17693 338 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 NPY1RP25929 384 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 NPAS1Q99742 590 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 RAB33BQ9H082 229 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 SLC35B3Q9H1N7 401 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 IGF2P01344 180 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 IGHV3-48P01763 117 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 RPS4Y1P22090 263 aaKnown RBP9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 MPV17P39210 176 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 MOGAT2Q3SYC2 334 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 PDPNQ86YL7 162 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 SCARF2Q96GP6 870 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 SOSTQ9BQB4 213 aa9.98□□□□□ -0.81
PCDHGA8-201ENST00000398604 ERVS71-1P61550 626 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 B2MP61769 119 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 KCNMB1Q16558 191 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 LGALSLQ3ZCW2 172 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 ZNF561Q8N587 486 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 SLC24A4Q8NFF2 622 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 RALYQ9UKM9 306 aaKnown RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 CHD5Q8TDI0 1954 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 PF4V1P10720 104 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 COX6A1P12074 109 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 RBM11P57052 281 aaKnown RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 SNAI3Q3KNW1 292 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 KRTCAP3Q53RY4 240 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 OVCH2Q7RTZ1 564 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 ZNF519Q8TB69 540 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 OPN4Q9UHM6 478 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 CYB5R1Q9UHQ9 305 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 FNDC1Q4ZHG4 1894 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 TRBV23-1A0A0A0MS06 115 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 SEMA7AO75326 666 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 S100A8P05109 93 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 ZNF883P0CG24 379 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 RUNX1Q01196 453 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 IL24Q13007 206 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 KLF9Q13886 244 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 PCOLCEQ15113 449 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 Q8WTZ3 238 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 SF3B6Q9Y3B4 125 aaKnown RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 HBZP02008 142 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 BMI1P35226 326 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 IZUMO4Q1ZYL8 232 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 LRRC75AQ8NAA5 344 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 BVESQ8NE79 360 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 LILRB1Q8NHL6 650 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 SCMH1Q96GD3 660 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 PARP11Q9NR21 331 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 PIPOXQ9P0Z9 390 aa9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 ELF5Q9UKW6 265 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 PCDHGA9Q9Y5G4 932 aaKnown RBP9.97□□□□□ -0.81
PCDHGA8-201ENST00000398604 RPL36A-HNRNPH2H7BZ11 118 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 CYB5R3P00387 301 aaPredicted RBP9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 PGA4P0DJD7 388 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 TMPRSS3P57727 454 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 NHLH2Q02577 135 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 PPP1R32Q7Z5V6 425 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 OR1L8Q8NGR8 309 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 SIGLEC12Q96PQ1 595 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 P2RX4Q99571 388 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 DDA1Q9BW61 102 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 PAGE4O60829 102 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 GALR1P47211 349 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 AMTP48728 403 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 ATP5J2P56134 94 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 FAM27E3Q08E93 113 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 Q1RN00 199 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 TEX30Q5JUR7 227 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 C10orf35Q96D05 121 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 LHFPL6Q9Y693 200 aa9.96□□□□□ -0.81
PCDHGA8-201ENST00000398604 TANC1Q9C0D5 1861 aa9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 CGB1A6NKQ9 187 aa9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 MGST3O14880 152 aa9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 OR5AL1P0C617 328 aa9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 SUMO1P63165 101 aaKnown RBP9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 TOMM20LQ6UXN7 152 aa9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 OR10D4PQ8NGN7 298 aa9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
PCDHGA8-201ENST00000398604 RNF2Q99496 336 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms