RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 STEAP3Q658P3 488 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 Q6ZS49 121 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 GVQW1Q8N7I0 195 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 OR4A4PQ8NGN8 299 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 ZDHHC16Q969W1 377 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 CHIAQ9BZP6 476 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 MMP28Q9H239 520 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 TNFRSF19Q9NS68 423 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 TBL2Q9Y4P3 447 aaKnown RBP20.56■□□□□ 0.88
U2AF1-203ENST00000398137 SLC31A2O15432 143 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 FBP1P09467 338 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 PRSS3P35030 304 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 RELBQ01201 579 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 SRSF7Q16629 238 aaKnown RBP eCLIP20.55■□□□□ 0.88
U2AF1-203ENST00000398137 IGSF11Q5DX21 431 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 ZNF439Q8NDP4 499 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 DIRAS2Q96HU8 199 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 MMP27Q9H306 513 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 A3GALT2U3KPV4 340 aa20.55■□□□□ 0.88
U2AF1-203ENST00000398137 FAM181BA6NEQ2 426 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 HSPA12AO43301 675 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 HTR1DP28221 377 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 MORN2Q502X0 79 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 RNASE12Q5GAN4 147 aaKnown RBP20.54■□□□□ 0.88
U2AF1-203ENST00000398137 MINOS1Q5TGZ0 78 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 SHISA2Q6UWI4 295 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 OCSTAMPQ9BR26 566 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 CABLES2Q9BTV7 478 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 IFT46Q9NQC8 304 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 MINOS1-NBL1R4GNA1 71 aa20.54■□□□□ 0.88
U2AF1-203ENST00000398137 PKD1L1Q8TDX9 2849 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 BET1O15155 118 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 RGS11O94810 467 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 CBX5P45973 191 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 Q3ZCU0 254 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 HOGA1Q86XE5 327 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 DYNAPQ8N1N2 210 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 BEST4Q8NFU0 473 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 OR10X1Q8NGY0 326 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 PARP12Q9H0J9 701 aaKnown RBP20.53■□□□□ 0.88
U2AF1-203ENST00000398137 AMMECR1Q9Y4X0 333 aaPredicted RBP20.53■□□□□ 0.88
U2AF1-203ENST00000398137 HILPDAQ9Y5L2 63 aa20.53■□□□□ 0.88
U2AF1-203ENST00000398137 BUB1B-PAK6H3BSN5 160 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 YPEL1O60688 119 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 LPLP06858 475 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 TNFSF8P32971 234 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 ZNF134P52741 427 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 SSX2Q16385 188 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 PLA1AQ53H76 456 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 CT45A1Q5HYN5 189 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 PRR31Q5SQ13 230 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 SLC25A48Q6ZT89 311 aaKnown RBP20.52■□□□□ 0.88
U2AF1-203ENST00000398137 C8orf31Q8N9H6 132 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 CT45A3Q8NHU0 189 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 YPEL2Q96QA6 119 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 BATF3Q9NR55 127 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 DPM3Q9P2X0 92 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 ANXA10Q9UJ72 324 aa20.52■□□□□ 0.88
U2AF1-203ENST00000398137 MGAM2Q2M2H8 2515 aa20.52■□□□□ 0.87
U2AF1-203ENST00000398137 ZBTB25P24278 435 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 CEACAM6P40199 344 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 LINC00311Q8N616 119 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 TMEM86BQ8N661 226 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 GPX8Q8TED1 209 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 SNAPC3Q92966 411 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 MALSU1Q96EH3 234 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 ABHD1Q96SE0 405 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 ABHD14AQ9BUJ0 271 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 SCPEP1Q9HB40 452 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 C1RLQ9NZP8 487 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 MMP24Q9Y5R2 645 aa20.51■□□□□ 0.87
U2AF1-203ENST00000398137 CMYA5Q8N3K9 4069 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 LEUTXA8MZ59 168 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 S100A5P33763 92 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 IL18Q14116 193 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 TPTE2P1Q5T6R2 138 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 LDLRAD3Q86YD5 345 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 OR2AK2Q8NG84 335 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 OR10J5Q8NHC4 309 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 CREB3L1Q96BA8 519 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 ANAPC10Q9UM13 185 aa20.5■□□□□ 0.87
U2AF1-203ENST00000398137 TRBV6-7A0A0A0MS04 114 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 LY6LH3BQJ8 138 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 TPPPO94811 219 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 DIRAS3O95661 229 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 IGHV4-59P01825 116 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 CEACAM3P40198 252 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 ARPC4P59998 168 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 LY6G6FQ5SQ64 297 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 TOMM40LQ969M1 308 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 GINS4Q9BRT9 223 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 RDH8Q9NYR8 311 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 POMT1Q9Y6A1 747 aa20.49■□□□□ 0.87
U2AF1-203ENST00000398137 ST8SIA5O15466 376 aa20.48■□□□□ 0.87
U2AF1-203ENST00000398137 IER3P46695 156 aa20.48■□□□□ 0.87
U2AF1-203ENST00000398137 SRSF4Q08170 494 aaKnown RBP20.48■□□□□ 0.87
U2AF1-203ENST00000398137 DIAPH2-AS1Q14236 149 aa20.48■□□□□ 0.87
U2AF1-203ENST00000398137 CNPY1Q3B7I2 92 aa20.48■□□□□ 0.87
U2AF1-203ENST00000398137 OR52I2Q8NH67 350 aa20.48■□□□□ 0.87
U2AF1-203ENST00000398137 C15orf40Q8WUR7 153 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms