RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 YPEL1O60688 119 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 CEACAM3P40198 252 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 LRRC75BQ2VPJ9 315 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 LAX1Q8IWV1 398 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 GVQW1Q8N7I0 195 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 C8orf31Q8N9H6 132 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 OR4A4PQ8NGN8 299 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 CREB3L1Q96BA8 519 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 YPEL2Q96QA6 119 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 DPAGT1Q9H3H5 408 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 TRIM77I1YAP6 450 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 ZBTB25P24278 435 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 CEACAM6P40199 344 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 Q3ZCU0 254 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 LINC00311Q8N616 119 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 RPEQ96AT9 228 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 OCSTAMPQ9BR26 566 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 ABHD14AQ9BUJ0 271 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 C6orf62Q9GZU0 229 aaPredicted RBP20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 POMT1Q9Y6A1 747 aa20.47■□□□□ 0.87
TMEM55B-202ENST00000398020 CLDN34H7C241 214 aa20.46■□□□□ 0.87
TMEM55B-202ENST00000398020 RGS11O94810 467 aa20.46■□□□□ 0.87
TMEM55B-202ENST00000398020 HLA-DQB1P01920 261 aa20.46■□□□□ 0.87
TMEM55B-202ENST00000398020 LY6EQ16553 131 aa20.46■□□□□ 0.87
TMEM55B-202ENST00000398020 KRTAP24-1Q3LI83 254 aa20.46■□□□□ 0.87
TMEM55B-202ENST00000398020 TOMM40LQ969M1 308 aa20.46■□□□□ 0.87
TMEM55B-202ENST00000398020 EXTL2Q9UBQ6 330 aa20.46■□□□□ 0.87
TMEM55B-202ENST00000398020 BTBD17A6NE02 478 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 REG1BP48304 166 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 SRSF7Q16629 238 aaKnown RBP eCLIP20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 Q6ZS49 121 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 SNX29P2Q8IUI4 249 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 OR2AK2Q8NG84 335 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 PIFOQ8TCI5 191 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 RNASE1P07998 156 aaKnown RBP20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 CD24P25063 80 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 LYG1Q8N1E2 194 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 TMEM86BQ8N661 226 aa20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 TAF15Q92804 592 aaKnown RBP eCLIP20.45■□□□□ 0.86
TMEM55B-202ENST00000398020 VGLL3A8MV65 326 aa20.44■□□□□ 0.86
TMEM55B-202ENST00000398020 ST8SIA5O15466 376 aa20.44■□□□□ 0.86
TMEM55B-202ENST00000398020 MCFD2Q8NI22 146 aa20.44■□□□□ 0.86
TMEM55B-202ENST00000398020 CABLES2Q9BTV7 478 aa20.44■□□□□ 0.86
TMEM55B-202ENST00000398020 ABCB10Q9NRK6 738 aa20.44■□□□□ 0.86
TMEM55B-202ENST00000398020 COL6A5A8TX70 2615 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 HSD17B6O14756 317 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 AANATQ16613 207 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 C16orf87Q6PH81 154 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 OR5R1Q8NH85 324 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 OR10J5Q8NHC4 309 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 TSC22D3Q99576 134 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 RDH8Q9NYR8 311 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 PTTG2Q9NZH5 202 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 VPREB3Q9UKI3 123 aa20.43■□□□□ 0.86
TMEM55B-202ENST00000398020 PRSS3P35030 304 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 CNIH2Q6PI25 160 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 HOGA1Q86XE5 327 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 BEST4Q8NFU0 473 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 ST6GALNAC6Q969X2 333 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 ANXA10Q9UJ72 324 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 TRBV6-7A0A0A0MS04 114 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 FAM181BA6NEQ2 426 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 IL3RAP26951 378 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 LY6G6FQ5SQ64 297 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 FAM216AQ8WUB2 273 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 GINS4Q9BRT9 223 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 C11orf54Q9H0W9 315 aaPredicted RBP20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 IFI27L2Q9H2X8 130 aa20.42■□□□□ 0.86
TMEM55B-202ENST00000398020 A0A1W2PPI3 338 aa20.41■□□□□ 0.86
TMEM55B-202ENST00000398020 OR3A3P47888 321 aa20.41■□□□□ 0.86
TMEM55B-202ENST00000398020 CCDC144NLQ6NUI1 221 aa20.41■□□□□ 0.86
TMEM55B-202ENST00000398020 ODF3L1Q8IXM7 274 aa20.41■□□□□ 0.86
TMEM55B-202ENST00000398020 ABHD14BQ96IU4 210 aa20.41■□□□□ 0.86
TMEM55B-202ENST00000398020 NXF2Q9GZY0 626 aaKnown RBP20.41■□□□□ 0.86
TMEM55B-202ENST00000398020 IFT46Q9NQC8 304 aa20.41■□□□□ 0.86
TMEM55B-202ENST00000398020 RNF212BA8MTL3 300 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 OOSP1A8MZH6 123 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 TIMM23O14925 209 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 GPR137BO60478 399 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 FBLN7Q53RD9 439 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 RNASE12Q5GAN4 147 aaKnown RBP20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 TMEM219Q86XT9 240 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 ZFAND2BQ8WV99 257 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 RTN4IP1Q8WWV3 396 aaPredicted RBP20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 SNAPC3Q92966 411 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 MDFIQ99750 246 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 ADAM30Q9UKF2 790 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 RNF150Q9ULK6 438 aa20.4■□□□□ 0.86
TMEM55B-202ENST00000398020 GAPDHP04406 335 aaKnown RBP20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 CBX5P45973 191 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 RAB7AP51149 207 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 DYNLT3P51808 116 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 ARHGDIBP52566 201 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 ARPC4P59998 168 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 CCBE1Q6UXH8 406 aaPredicted RBP20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 DRAM1Q8N682 238 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 OR56B4Q8NH76 319 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 EDARADDQ8WWZ3 215 aa20.39■□□□□ 0.86
TMEM55B-202ENST00000398020 TMEM158Q8WZ71 300 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms