RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TNFSF10P50591 281 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 HMGN3Q15651 99 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 IZUMO4Q1ZYL8 232 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 KHDC3LQ587J8 217 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 Q6P435 159 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SCCPDHQ8NBX0 429 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 EIF5A2Q9GZV4 153 aaKnown RBP15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SIRT7Q9NRC8 400 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CDIPTO14735 213 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 RAB4AP20338 218 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 F2RP25116 425 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CCL11P51671 97 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PPP1CBP62140 327 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 VAMP2P63027 116 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 GUK1Q16774 197 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ODF3L1Q8IXM7 274 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PLPPR1Q8TBJ4 325 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 GLRX2Q9NS18 164 aa15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 LYRM2Q9NU23 88 aaPredicted RBP15.55■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CNOT1A5YKK6 2376 aaKnown RBP15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 H0Y980 276 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SOX15O60248 233 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SOX8P57073 446 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 H1FOOQ8IZA3 346 aaPredicted RBP15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 OR5C1Q8NGR4 320 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 FAM213BQ8TBF2 198 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 GMPPAQ96IJ6 420 aaPredicted RBP15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 RTL8AQ9BWD3 113 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SCRT1Q9BWW7 348 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PLEKHF2Q9H8W4 249 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SVILO95425 2214 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PHOX2AO14813 284 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 EREGO14944 169 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CHST1O43916 411 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 OR2H2O95918 312 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SOD3P08294 240 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PSG2P11465 335 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ZNF25P17030 456 aaPredicted RBP15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 UBE2NP61088 152 aaKnown RBP15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ZNF880Q6PDB4 577 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 OR5D13Q8NGL4 314 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 DTD1Q8TEA8 209 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ABHD14AQ9BUJ0 271 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 DIDO1Q9BTC0 2240 aaKnown RBP15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 NBEAQ8NFP9 2946 aa15.54■□□□□ 0.08
CHRFAM7A-202ENST00000397827 TRBV6-6A0A0A6YYG2 114 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ATP6V0CP27449 155 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 HOXA4Q00056 320 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ID3Q02535 119 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ZNF154Q13106 437 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 HEPN1Q6WQI6 88 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 SLC25A40Q8TBP6 338 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CDH20Q9HBT6 801 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 TAAR3PQ9P1P4 343 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 MMP24Q9Y5R2 645 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PPP1R2P9O14990 202 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 FABP4P15090 132 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PPP1CCP36873 323 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 TRIB1Q96RU8 372 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 OPN3Q9H1Y3 402 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CLEC18AA5D8T8 446 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 A8MWP6 167 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 H0YL77 283 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 GRPP07492 148 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CLEC18CQ8NCF0 446 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 FDCSPQ8NFU4 85 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 FBXO7Q9Y3I1 522 aa15.53■□□□□ 0.08
CHRFAM7A-202ENST00000397827 H3BP45 60 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 MKRN2OSH3BPM6 223 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 OR2C1O95371 312 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 PAX1P15863 534 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CEACAM6P40199 344 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 DYNLT3P51808 116 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 ZNF266Q14584 549 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CNEP1R1Q8N9A8 125 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 OR1J1Q8NGS3 322 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 OR2G3Q8NGZ4 309 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CD300LFQ8TDQ1 290 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 TRAPPC2LQ9UL33 140 aa15.52■□□□□ 0.08
CHRFAM7A-202ENST00000397827 CACNA1DQ01668 2161 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 LRP5LA4QPB2 252 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CDRT15L2A8MXV6 281 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 PITX3O75364 302 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 SERPINE2P07093 398 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CEBPDP49716 269 aaPredicted RBP15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 BPIFB3P59826 476 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RPP30P78346 268 aaKnown RBP15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF674Q2M3X9 581 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 OR10V1Q8NGI7 309 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CABLES2Q9BTV7 478 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 PPP1R3CQ9UQK1 317 aa15.52■□□□□ 0.07
CHRFAM7A-202ENST00000397827 DUXBA0A1W2PPF3 345 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 K7N7A8 449 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HSPA12AO43301 675 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 NXPH2O95156 264 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 IGLV2-14P01704 120 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 TGFBR3Q03167 851 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 PSG7Q13046 419 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 MRPL49Q13405 166 aaKnown RBP15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 DNLZQ5SXM8 178 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms