RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 M0R381 172 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 IGF2P01344 180 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 C19orf48Q6RUI8 117 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 KIR3DL3Q8N743 410 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 CNRIP1Q96F85 164 aaPredicted RBP10.79□□□□□ -0.68
SMU1-201ENST00000397149 C2orf88Q9BSF0 95 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 RGPD8O14715 1765 aaPredicted RBP10.79□□□□□ -0.68
SMU1-201ENST00000397149 IGHV5-51A0A0C4DH38 117 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 FOXI3A8MTJ6 420 aaPredicted RBP10.79□□□□□ -0.68
SMU1-201ENST00000397149 CD1AP06126 327 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 CDC20Q12834 499 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 COX19Q49B96 90 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 MRPL24Q96A35 216 aaKnown RBP10.79□□□□□ -0.68
SMU1-201ENST00000397149 HSPB1P04792 205 aaKnown RBP10.78□□□□□ -0.68
SMU1-201ENST00000397149 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMU1-201ENST00000397149 TRGV2A0A075B6R0 118 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 EPHA8P29322 1005 aaPredicted RBP10.78□□□□□ -0.68
SMU1-201ENST00000397149 RPL27AP46776 148 aaKnown RBP10.78□□□□□ -0.68
SMU1-201ENST00000397149 FOXB2Q5VYV0 432 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 PQLC2Q6ZP29 291 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 ASB1Q9Y576 335 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 S4R3C0 116 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 LINC00869P0C866 280 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 GABRG2P18507 467 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 P2RY1P47900 373 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 RAC3P60763 192 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 ATP5G2Q06055 141 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 SSC4DQ8WTU2 575 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 C16orf97H3BN30 126 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 ZNF385CQ66K41 422 aaPredicted RBP10.78□□□□□ -0.68
SMU1-201ENST00000397149 STPG3Q8N7X2 389 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 SCNM1Q9BWG6 230 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 CEACAM5P06731 702 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 ADAD2Q8NCV1 583 aaKnown RBP10.78□□□□□ -0.68
SMU1-201ENST00000397149 OR10S1Q8NGN2 331 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 SIRT7Q9NRC8 400 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 CA10Q9NS85 328 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 PXMP4Q9Y6I8 212 aa10.78□□□□□ -0.68
SMU1-201ENST00000397149 RAE1P78406 368 aaKnown RBP10.77□□□□□ -0.68
SMU1-201ENST00000397149 ZNF275Q9NSD4 429 aaPredicted RBP10.77□□□□□ -0.68
SMU1-201ENST00000397149 PEAK1Q9H792 1746 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 TRAV8-2A0A0B4J237 113 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 SPAARA0A1B0GVQ0 90 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 LINC00862A6NCI5 91 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 ZFPL1O95159 310 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 LTBRP36941 435 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 SNRPD3P62318 126 aaKnown RBP10.77□□□□□ -0.68
SMU1-201ENST00000397149 RPL32P62910 135 aaKnown RBP10.77□□□□□ -0.68
SMU1-201ENST00000397149 ZNF415Q09FC8 603 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 C12orf54Q6X4T0 127 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 SPEM1Q8N4L4 309 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 OR2Y1Q8NGV0 311 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 CDC42EP3Q9UKI2 254 aa10.77□□□□□ -0.68
SMU1-201ENST00000397149 IGKV6D-21A0A0A0MT36 114 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 TMEM229AB2RXF0 380 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 LMO7DNF2Z398 122 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 GZMHP20718 246 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 PRSS41Q7RTY9 318 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 ZNF714Q96N38 554 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 ARID1AO14497 2285 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 NDUFA3O95167 84 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 CA1P00915 261 aaPredicted RBP10.77□□□□□ -0.69
SMU1-201ENST00000397149 MPC1Q9Y5U8 109 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 MYH1P12882 1939 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 LOC390937A0A1W2PQ73 354 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 SMIM18P0DKX4 95 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 MRGPRX3Q96LB0 322 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 SHPRHQ149N8 1683 aa10.77□□□□□ -0.69
SMU1-201ENST00000397149 RRHO14718 337 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 CFDP00746 253 aaPredicted RBP10.76□□□□□ -0.69
SMU1-201ENST00000397149 MUC1P15941 1255 aaPredicted RBP10.76□□□□□ -0.69
SMU1-201ENST00000397149 PCP4P48539 62 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 ATP5J2P56134 94 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 K7N7A8 449 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 TMEM50BP56557 158 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 SLC25A34Q6PIV7 304 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 OR6X1Q8NH79 312 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 SPSB4Q96A44 273 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 ST6GAL2Q96JF0 529 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 RNF122Q9H9V4 155 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 CTSVO60911 334 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 MRGPRGQ86SM5 289 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 FGF20Q9NP95 211 aaPredicted RBP10.76□□□□□ -0.69
SMU1-201ENST00000397149 PPYP01298 95 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 MMP16P51512 607 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 MVDP53602 400 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 UBE2V2Q15819 145 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 GFI1BQ5VTD9 330 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 RCC1P18754 421 aaPredicted RBP10.76□□□□□ -0.69
SMU1-201ENST00000397149 LINC01587Q99440 93 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 SYT11Q9BT88 431 aa10.76□□□□□ -0.69
SMU1-201ENST00000397149 S1PR2O95136 353 aa10.75□□□□□ -0.69
SMU1-201ENST00000397149 TMEM196Q5HYL7 178 aa10.75□□□□□ -0.69
SMU1-201ENST00000397149 ST6GALNAC6Q969X2 333 aa10.75□□□□□ -0.69
SMU1-201ENST00000397149 LRRC3BQ96PB8 259 aa10.75□□□□□ -0.69
SMU1-201ENST00000397149 TLNRD1Q9H1K6 362 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms