RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SECTM1Q8WVN6 248 aa11.2□□□□□ -0.62
MCF2L-209ENST00000397036 RTN4IP1Q8WWV3 396 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-209ENST00000397036 H1FXQ92522 213 aaKnown RBP11.2□□□□□ -0.62
MCF2L-209ENST00000397036 FAM168AQ92567 244 aa11.2□□□□□ -0.62
MCF2L-209ENST00000397036 SLC2A9Q9NRM0 540 aa11.2□□□□□ -0.62
MCF2L-209ENST00000397036 GNG12Q9UBI6 72 aa11.2□□□□□ -0.62
MCF2L-209ENST00000397036 KCNIP3Q9Y2W7 256 aa11.2□□□□□ -0.62
MCF2L-209ENST00000397036 NAV2Q8IVL1 2488 aa11.2□□□□□ -0.62
MCF2L-209ENST00000397036 A0A087X0M5 115 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 A0A1B0GX30 115 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 A8MXK9 166 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 HLA-AP01891 365 aaKnown RBP11.19□□□□□ -0.62
MCF2L-209ENST00000397036 SULT1A3P0DMM9 295 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 SULT1A4P0DMN0 295 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 PI3P19957 117 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 RAB7AP51149 207 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 LMO4P61968 165 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 GNB2P62879 340 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 CBX3Q13185 183 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 ESCO2Q56NI9 601 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 CLEC2AQ6UVW9 174 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 C1orf122Q6ZSJ8 110 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 C12orf45Q8N5I9 185 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-209ENST00000397036 C11orf42Q8N5U0 333 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 UBALD1Q8TB05 177 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 MBD6Q96DN6 1003 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 PIMREGQ9BSJ6 248 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 SSBP3Q9BWW4 388 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-209ENST00000397036 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 NAA60Q9H7X0 242 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 CCL28Q9NRJ3 127 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 POLR3KQ9Y2Y1 108 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-209ENST00000397036 TENM4Q6N022 2769 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 MPPED1O15442 326 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 OR8U9P0C7N5 309 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 ANXA3P12429 323 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 PPP1CCP36873 323 aaKnown RBP11.19□□□□□ -0.62
MCF2L-209ENST00000397036 GNMTQ14749 295 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 ZNF818PQ6ZRF7 136 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 ZNF645Q8N7E2 425 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 OR8U1Q8NH10 309 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 ZNF596Q8TC21 504 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 DACT3Q96B18 629 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-209ENST00000397036 PHB2Q99623 299 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 SUCNR1Q9BXA5 334 aa11.19□□□□□ -0.62
MCF2L-209ENST00000397036 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
MCF2L-209ENST00000397036 LOC105371242A0A075B767 164 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 PIGBOS1A0A0B4J2F0 54 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 hCG_1809904A0A1W2PP81 198 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 A0A1W2PPE2 198 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 A0A1W2PR64 198 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 A0A1W2PRV1 198 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 DBX1A6NMT0 343 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 SSNA1O43805 119 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 PGLYRP1O75594 196 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-209ENST00000397036 IFNA2P01563 188 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 LIPFP07098 398 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 CD34P28906 385 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 TCTEX1D1Q8N7M0 179 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 LRTM2Q8N967 370 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-209ENST00000397036 ZNF439Q8NDP4 499 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 OR2AK2Q8NG84 335 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 CLDND2Q8NHS1 167 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 ASB13Q8WXK3 278 aa11.18□□□□□ -0.62
MCF2L-209ENST00000397036 FAM212BQ9NTI7 297 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-209ENST00000397036 RBM7Q9Y580 266 aaKnown RBP11.18□□□□□ -0.62
MCF2L-209ENST00000397036 MED13LQ71F56 2210 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 CENPEQ02224 2701 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 IGHV3-43A0A0B4J1X8 118 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 TEX13DA0A0J9YY54 714 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-209ENST00000397036 M0R1W7 72 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 MMP23AO75900 390 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 IGHV3-43DP0DP04 118 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 CCL3L1P16619 93 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 OMGP23515 440 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 VAMP1P23763 118 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 KRTAP10-9P60411 292 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 EIF4EBP1Q13541 118 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-209ENST00000397036 FCN2Q15485 313 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 PHLDA2Q53GA4 152 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 SLC25A48Q6ZT89 311 aaKnown RBP11.17□□□□□ -0.62
MCF2L-209ENST00000397036 AKAP14Q86UN6 197 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 DRAM1Q8N682 238 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 COQ8AQ8NI60 647 aa11.17□□□□□ -0.62
MCF2L-209ENST00000397036 UTP20O75691 2785 aaKnown RBP11.17□□□□□ -0.62
MCF2L-209ENST00000397036 ABCA12Q86UK0 2595 aa11.16□□□□□ -0.62
MCF2L-209ENST00000397036 MEX3AA1L020 520 aaKnown RBP11.16□□□□□ -0.62
MCF2L-209ENST00000397036 KIAA1324LA8MWY0 1029 aaPredicted RBP11.16□□□□□ -0.62
MCF2L-209ENST00000397036 C22orf46C9J442 243 aa11.16□□□□□ -0.62
MCF2L-209ENST00000397036 FOXH1O75593 365 aa11.16□□□□□ -0.62
MCF2L-209ENST00000397036 CCNKO75909 580 aa11.16□□□□□ -0.62
MCF2L-209ENST00000397036 OR2A4O95047 310 aa11.16□□□□□ -0.62
MCF2L-209ENST00000397036 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
MCF2L-209ENST00000397036 SLC25A16P16260 332 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms