RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SRYQ05066 204 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 C16orf82Q7Z2V1 217 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 TECTBQ96PL2 329 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 PYGO2Q9BRQ0 406 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 PSENENQ9NZ42 101 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 GJE1A6NN92 205 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 RAMP3O60896 148 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 NPPCP23582 126 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 LINC00205P59089 165 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 RPS16P62249 146 aaKnown RBP11.77□□□□□ -0.52
NUP98-204ENST00000397004 IL11RAQ14626 422 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 Q6P435 159 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 SAXO1Q8IYX7 474 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 PLK3Q9H4B4 646 aa11.77□□□□□ -0.52
NUP98-204ENST00000397004 KIR2DS1A0A191URI9 304 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 PATE3B3GLJ2 98 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 SELEP16581 610 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 KIR2DS4P43632 304 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 PCBD1P61457 104 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 ERVS71-1P61550 626 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 KIR2DS1Q14954 304 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 PSMF1Q92530 271 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 DBX2Q6ZNG2 339 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 REC114Q7Z4M0 266 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 OR51G1Q8NGK1 321 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 OR10J5Q8NHC4 309 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
NUP98-204ENST00000397004 KCNE4Q8WWG9 221 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 RAB40CQ96S21 281 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 DUSP23Q9BVJ7 150 aa11.77□□□□□ -0.53
NUP98-204ENST00000397004 A0A087X0M5 115 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 A0A1B0GX30 115 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 DFFBO76075 338 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 SERPINE2P07093 398 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 RPL23P62829 140 aaKnown RBP11.76□□□□□ -0.53
NUP98-204ENST00000397004 GNB2P62879 340 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 VASH2Q86V25 355 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 TRBV6-6A0A0A6YYG2 114 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 TRAPPC2LH3BP13 241 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 SLC25A6P12236 298 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 FAM180AQ6UWF9 173 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 CENPVQ7Z7K6 275 aaPredicted RBP11.76□□□□□ -0.53
NUP98-204ENST00000397004 LRFN1Q9P244 771 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 VAX2Q9UIW0 290 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 MAP1LC3B2A6NCE7 125 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 IFNA5P01569 189 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 ZXDAP98168 799 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 UBALD2Q8IYN6 164 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 OR10V1Q8NGI7 309 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 MAP1LC3BQ9GZQ8 125 aa11.76□□□□□ -0.53
NUP98-204ENST00000397004 PRR14LQ5THK1 2151 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 AHCTF1Q8WYP5 2266 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 UBE2L5PA0A1B0GUS4 154 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 ZNF737O75373 536 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 CNOT4O95628 575 aaKnown RBP11.75□□□□□ -0.53
NUP98-204ENST00000397004 CYC1P08574 325 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 TDGF1P13385 188 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 PNRC1Q12796 327 aaPredicted RBP11.75□□□□□ -0.53
NUP98-204ENST00000397004 SLC25A24Q6NUK1 477 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.75□□□□□ -0.53
NUP98-204ENST00000397004 PSMG3Q9BT73 122 aaPredicted RBP11.75□□□□□ -0.53
NUP98-204ENST00000397004 P04436 131 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 PKIAP61925 76 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 SPATA46Q5T0L3 261 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 TAF15Q92804 592 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP98-204ENST00000397004 POM121Q96HA1 1249 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 WFIKKN1Q96NZ8 548 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 PCGF1Q9BSM1 259 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 A0A1B0GUS0 222 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 GDF1P27539 372 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 JOSD1Q15040 202 aaPredicted RBP11.75□□□□□ -0.53
NUP98-204ENST00000397004 ADIRFQ15847 76 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 SSX2Q16385 188 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 MRPL21Q7Z2W9 205 aaKnown RBP11.75□□□□□ -0.53
NUP98-204ENST00000397004 MRGPRGQ86SM5 289 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 OR10A7Q8NGE5 316 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 SGCZQ96LD1 299 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 CACNA1DQ01668 2161 aa11.75□□□□□ -0.53
NUP98-204ENST00000397004 A8MWP6 167 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 NTN3O00634 580 aaPredicted RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 CXCL12P48061 93 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 LHX2P50458 406 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 TMEM41BQ5BJD5 291 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 OR8G2PQ6IF36 304 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 MKXQ8IYA7 352 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 DEFB123Q8N688 67 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 RPUSD4Q96CM3 377 aaKnown RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 HIST1H2AAQ96QV6 131 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 SIT1Q9Y3P8 196 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 IGKV3D-15A0A087WSY6 115 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 TFF1P04155 84 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 C3AR1Q16581 482 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms