RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 GCGP01275 180 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 PSMB3P49720 205 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 RAC1P63000 192 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 MEF2BQ02080 365 aaPredicted RBP8.4□□□□□ -1.07
TRIM39-203ENST00000396547 AARDQ4LEZ3 155 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 TCF23Q7RTU1 214 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 PILRBQ9UKJ0 227 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 PAM16Q9Y3D7 125 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 RNF115Q9Y4L5 304 aa8.4□□□□□ -1.07
TRIM39-203ENST00000396547 IGKV1-6A0A0C4DH72 117 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 A0A0J9YW62 118 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 TRAPPC6AO75865 159 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 CEACAM1P13688 526 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 HNRNPKP61978 463 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIM39-203ENST00000396547 PSG4Q00888 419 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM41BQ5BJD5 291 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 RPP25LQ8N5L8 163 aaKnown RBP8.39□□□□□ -1.07
TRIM39-203ENST00000396547 SPACA9Q96E40 222 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-203ENST00000396547 CTDSP1Q9GZU7 261 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 RNF150Q9ULK6 438 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 LMO7DNF2Z398 122 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 SCRG1O75711 98 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 GYPAP02724 150 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 F2RP25116 425 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 UCP1P25874 307 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 S100GP29377 79 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 NTF4P34130 210 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 TFPI2P48307 235 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 CEACAM16Q2WEN9 425 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-203ENST00000396547 ZNF525Q8N782 197 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 CRIM1Q9NZV1 1036 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 GOLT1BQ9Y3E0 138 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 TRAPPC1Q9Y5R8 145 aa8.39□□□□□ -1.07
TRIM39-203ENST00000396547 CCL3P10147 92 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 RAB4BP61018 213 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 HAPLN4Q86UW8 402 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 OR56B2PQ8NGI1 322 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM242Q9NWH2 141 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 OR1A1Q9P1Q5 309 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 SEMA5BQ9P283 1151 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 SYNGR3O43761 229 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 OTX1P32242 354 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-203ENST00000396547 CNN1P51911 297 aaKnown RBP8.38□□□□□ -1.07
TRIM39-203ENST00000396547 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 SLC38A11Q08AI6 406 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 RAB35Q15286 201 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 AAED1Q7RTV5 226 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 ZNF295-AS1Q8N0V1 137 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 ZIC4Q8N9L1 334 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 BEND2Q8NDZ0 799 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 OR10J5Q8NHC4 309 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 SRXN1Q9BYN0 137 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 PARD6AQ9NPB6 346 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 NAGKQ9UJ70 344 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 POLR3KQ9Y2Y1 108 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-203ENST00000396547 PPIAL4AQ9Y536 164 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM238LA0A1B0GVL6 79 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 CLEC18AA5D8T8 446 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 KIAA1324LA8MWY0 1029 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-203ENST00000396547 GFRA3O60609 400 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 HRASP01112 189 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 GCH1P30793 250 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 HBG1P69891 147 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 HBG2P69892 147 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 CLEC18CQ8NCF0 446 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
TRIM39-203ENST00000396547 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 DLL3Q9NYJ7 618 aa8.38□□□□□ -1.07
TRIM39-203ENST00000396547 B4E171 279 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TP53I11O14683 189 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TM4SF5O14894 197 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 SYNGR1O43759 233 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 KBTBD11O94819 623 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 KRASP01116 189 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM11P17152 192 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TDGF1P3P51864 188 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM170AQ8WVE7 144 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 PSMF1Q92530 271 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM54Q969K7 222 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 FAM103A1Q9BTL3 118 aaKnown RBP8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TMEM208Q9BTX3 173 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 FSCN3Q9NQT6 498 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TCFL5Q9UL49 500 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 FREM1Q5H8C1 2179 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 NBEAQ8NFP9 2946 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 TRAPPC2LH3BP13 241 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 CXCL13O43927 109 aa8.37□□□□□ -1.07
TRIM39-203ENST00000396547 IRF2P14316 349 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms