RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RFX7Q2KHR2 1363 aa3.1□□□□□ -1.91
HMGB1P10-201ENST00000395823 RIMS2Q9UQ26 1411 aa3.1□□□□□ -1.91
HMGB1P10-201ENST00000395823 COL16A1Q07092 1604 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 CCL15-CCL14A0A0B4J2E2 113 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 IGSF23A1L1A6 192 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 LINC00587B1AMM8 73 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 PSPHP1O15172 72 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 IGKV1D-16P01601 117 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 BPGMP07738 259 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 AKR1C3P42330 323 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 TAS2R43P59537 309 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 NAA20P61599 178 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 DYNLL1P63167 89 aaKnown RBP3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 SLC35A2P78381 396 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 SMAGPQ0VAQ4 97 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 CCL15Q16663 113 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 UBE2SQ16763 222 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 SMIM21Q3B7S5 101 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 TMEM128Q5BJH2 165 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 CLEC12AQ5QGZ9 265 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 SAMD13Q5VXD3 122 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 TEX36Q5VZQ5 186 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 LAMTOR1Q6IAA8 161 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 TBPL2Q6SJ96 375 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 OPN5Q6U736 354 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 ZCCHC24Q8N2G6 241 aaKnown RBP3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 SMIM20Q8N5G0 67 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 DRAM1Q8N682 238 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 OR4P4Q8NGL7 312 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 OR1L8Q8NGR8 309 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 OR4X1Q8NH49 305 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 GRPEL2Q8TAA5 225 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 DNAJC9Q8WXX5 260 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 YIPF5Q969M3 257 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 PPCDCQ96CD2 204 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 L3HYPDHQ96EM0 354 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 CYYR1Q96J86 154 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 CNBD2Q96M20 576 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 C12orf57Q99622 126 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 NDFIP1Q9BT67 221 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 MED18Q9BUE0 208 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 EMC6Q9BV81 110 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 FBXL15Q9H469 300 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 PLEKHF2Q9H8W4 249 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 ASB4Q9Y574 426 aa3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 YTHDF2Q9Y5A9 579 aaKnown RBP3.09□□□□□ -1.91
HMGB1P10-201ENST00000395823 SYNMO15061 1565 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 EIF4G3O43432 1585 aaKnown RBP3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 ADAMTSL3P82987 1691 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 PQLC2LA1A4F0 135 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 CCDC160A6NGH7 325 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR5H1A6NKK0 313 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 I3L4J1 428 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 J3QT63 122 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 M0R1X1 148 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 STK16O75716 305 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 GADD45GO95257 159 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 IFNA10P01566 189 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 IGLV3-25P01717 112 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 IGHV3-11P01762 117 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR56A5P0C7T3 313 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 ZNF806P0C7X5 589 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 IFITM3Q01628 133 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 ACOT6Q3I5F7 207 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 ZNF684Q5T5D7 378 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 FAM183BPQ6ZVS7 135 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 SAXO1Q8IYX7 474 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 GAPTQ8N292 157 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR4M1Q8NGD0 313 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 DCAKDQ8WVC6 231 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 KLF6Q99612 283 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 GINS3Q9BRX5 216 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 TAPBPLQ9BX59 468 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 MS4A8Q9BY19 250 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 ULBP3Q9BZM4 244 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 ABCG5Q9H222 651 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 RASL12Q9NYN1 266 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 UTP11Q9Y3A2 253 aaKnown RBP3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 TMEM14AQ9Y6G1 99 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 SOGA1O94964 1423 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 CNTLNQ9NXG0 1405 aa3.08□□□□□ -1.92
HMGB1P10-201ENST00000395823 IGKV6-21A0A0C4DH24 114 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 TEX50A0A1B0GTY4 177 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 PVALEFA0A1B0GWK0 134 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MAP1LC3B2A6NCE7 125 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR4C46A6NHA9 309 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 FAM159BA6NKW6 160 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 E7EQ34 232 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 COPEO14579 308 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 CHST10O43529 356 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR2J2O76002 312 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 HLA-DQA1P01909 254 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 CRYGDP07320 174 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 ADRA2AP08913 450 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MMP7P09237 267 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR5G3P0C626 314 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 DDTP30046 118 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 TSPOP30536 169 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 APLNRP35414 380 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MAP2K4P45985 399 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms