RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ERVK-16P61578 105 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 DNM1P46Q6ZS02 220 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 POC1AQ8NBT0 407 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 DOPEY2Q9Y3R5 2298 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 H7C1Q1 480 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 TNFSF13O75888 250 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 HKR1P10072 659 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 ZNF709Q8N972 641 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 NEUROG1Q92886 237 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 SLC25A31Q9H0C2 315 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 SAP30LQ9HAJ7 183 aa13.42□□□□□ -0.26
SMARCD1-202ENST00000394963 SETD2Q9BYW2 2564 aaPredicted RBP13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 IGKV1-6A0A0C4DH72 117 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 CLEC18AA5D8T8 446 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 BAXQ07812 192 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 NRN1LQ496H8 165 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 SPRNQ5BIV9 151 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 CLEC18CQ8NCF0 446 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 MRPL37Q9BZE1 423 aaKnown RBP13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 TMEM222Q9H0R3 208 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 RHOFQ9HBH0 211 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 UBE2L5PA0A1B0GUS4 154 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 VDAC1P21796 283 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 SRPXP78539 464 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 WDR82Q6UXN9 313 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 DOLPP1Q86YN1 238 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 ADAMTS20P59510 1910 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 KIAA1324LA8MWY0 1029 aaPredicted RBP13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 CD8AP01732 235 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 DAOP14920 347 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 BSPH1Q075Z2 132 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 ENY2Q9NPA8 101 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 DKK4Q9UBT3 224 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 MLXQ9UH92 298 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 URGCP-MRPS24S4R325 110 aa13.41□□□□□ -0.26
SMARCD1-202ENST00000394963 ARPC4-TTLL3A0A0A6YYG9 625 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 LY6HO94772 140 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 IGHG3P01860 377 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 SNRPCP09234 159 aaKnown RBP13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 EWSR1Q01844 656 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 DUX4L9Q6RFH8 374 aaPredicted RBP13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 Q6ZR03 302 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 DRAM1Q8N682 238 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 OR4A16Q8NH70 328 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 FAM215AQ9Y5M1 114 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 MZT1Q08AG7 82 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 RPL39P5Q59GN2 51 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 FGFRL1Q8N441 504 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 GPR146Q96CH1 333 aa13.4□□□□□ -0.26
SMARCD1-202ENST00000394963 IGHV3-72A0A0B4J1Y9 119 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 B3GALNT1O75752 331 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 EGR1P18146 543 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 ZFP82Q8N141 532 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 OR4A4PQ8NGN8 299 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 RSG1Q9BU20 258 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 SHARPINQ9H0F6 387 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 KCNJ16Q9NPI9 418 aa13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 LIN7CQ9NUP9 197 aaKnown RBP13.4□□□□□ -0.27
SMARCD1-202ENST00000394963 RAMP3O60896 148 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 DEDDO75618 318 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 NAT1P18440 290 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 DHRS11Q6UWP2 260 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 Q6ZS92 163 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 C22orf34Q6ZV56 151 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 USB1Q9BQ65 265 aaKnown RBP13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 NUDT16L1Q9BRJ7 211 aaKnown RBP13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 LINC00862A6NCI5 91 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 SLC25A4P12235 298 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 DLX1P56177 255 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 RPS23P62266 143 aaKnown RBP13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 SRSF3P84103 164 aaKnown RBP13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 CLEC12BQ2HXU8 276 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 SELENOHQ8IZQ5 122 aaKnown RBP13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 ZNRD1Q9P1U0 126 aa13.39□□□□□ -0.27
SMARCD1-202ENST00000394963 LRRC30A6NM36 301 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 CD40P25942 277 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 AVPI1Q5T686 147 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 TMEM65Q6PI78 240 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 ACP7Q6ZNF0 438 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 SSC4DQ8WTU2 575 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 NTNG2Q96CW9 530 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 PKIBQ9C010 78 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 ZFP57Q9NU63 452 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 ATPIF1Q9UII2 106 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 A0A0G2JNJ9 132 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 PGA5P0DJD9 388 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 CFPP27918 469 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 MSMO1Q15800 293 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 BVESQ8NE79 360 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 PLSCR4Q9NRQ2 329 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 Q9UFV3 132 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 ARHGAP32A7KAX9 2087 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 KRBOX1C9JBD0 128 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 SNAPC5O75971 98 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 RAB2AP61019 212 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 NRIP2Q9BQI9 281 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 ABHD14AQ9BUJ0 271 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms