RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 EGLN1Q9GZT9 426 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 MS4A5Q9H3V2 200 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 GCN1Q92616 2671 aaKnown RBP12.44□□□□□ -0.42
CCT4-201ENST00000394440 CGB3P0DN86 165 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 CGB7P0DN87 165 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 GZMHP20718 246 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 DRAM1Q8N682 238 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 OR1S1Q8NH92 325 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 FAM234AQ9H0X4 552 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 ZNF665Q9H7R5 613 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 USF3Q68DE3 2245 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 SWI5Q1ZZU3 235 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 ESCO2Q56NI9 601 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 SLC51BQ86UW2 128 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 RBPMSQ93062 196 aaKnown RBP12.43□□□□□ -0.42
CCT4-201ENST00000394440 C14orf79Q96F83 325 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 CISD1Q9NZ45 108 aaKnown RBP12.43□□□□□ -0.42
CCT4-201ENST00000394440 TMEM178BH3BS89 294 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 SIGLEC5O15389 551 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 SPINT2O43291 252 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 BCL2L11O43521 198 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
CCT4-201ENST00000394440 EIF4EBP1Q13541 118 aaPredicted RBP12.43□□□□□ -0.42
CCT4-201ENST00000394440 MSMO1Q15800 293 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 ZNF695Q8IW36 515 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 ZNF645Q8N7E2 425 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 INO80EQ8NBZ0 244 aaPredicted RBP12.43□□□□□ -0.42
CCT4-201ENST00000394440 DEFB108BQ8NET1 73 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 C5orf30Q96GV9 206 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 UBQLN2Q9UHD9 624 aa12.43□□□□□ -0.42
CCT4-201ENST00000394440 RBM7Q9Y580 266 aaKnown RBP12.43□□□□□ -0.42
CCT4-201ENST00000394440 RPS10-NUDT3A0A1W2PQS6 291 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 MEX3AA1L020 520 aaKnown RBP12.42□□□□□ -0.42
CCT4-201ENST00000394440 CLEC18AA5D8T8 446 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 MSGN1A6NI15 193 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 LGALS8O00214 317 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 F2RL2O00254 374 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 KCNAB3O43448 404 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 DEDDO75618 318 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 GYPAP02724 150 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 PLA2G2AP14555 144 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 S100A10P60903 97 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 ZNF672Q499Z4 452 aaPredicted RBP12.42□□□□□ -0.42
CCT4-201ENST00000394440 FAM216BQ8N7L0 139 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 CLEC18CQ8NCF0 446 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 OR52M1Q8NGK5 317 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 OR4D5Q8NGN0 318 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 OR51H1Q8NH63 302 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 RFESDQ8TAC1 157 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 NINJ1Q92982 152 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 AQP10Q96PS8 301 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 CCL13Q99616 98 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 OR2S2Q9NQN1 319 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 OR6C3Q9NZP0 311 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 ABCA4P78363 2273 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 MBPP02686 304 aaPredicted RBP12.42□□□□□ -0.42
CCT4-201ENST00000394440 EDDM3BP56851 147 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 C1orf87Q8N0U7 546 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 ZBTB34Q8NCN2 500 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 OR2D2Q9H210 308 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 TMEM106BQ9NUM4 274 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 JPT1Q9UK76 154 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 KCNS2Q9ULS6 477 aa12.42□□□□□ -0.42
CCT4-201ENST00000394440 VDAC1P21796 283 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 C4orf17Q53FE4 359 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 TCF23Q7RTU1 214 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 AGMATQ9BSE5 352 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 IGHV3-43A0A0B4J1X8 118 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 TRAV38-1A0A0B4J264 116 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 KANTRA0A1W2PQU2 76 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 K7EPK0 472 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 TNFRSF13BO14836 293 aaPredicted RBP12.41□□□□□ -0.42
CCT4-201ENST00000394440 IGHV3-43DP0DP04 118 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 LOXL3P58215 753 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 ZNF808Q8N4W9 903 aaPredicted RBP12.41□□□□□ -0.42
CCT4-201ENST00000394440 FAM71E2Q8N5Q1 922 aa12.41□□□□□ -0.42
CCT4-201ENST00000394440 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.42
CCT4-201ENST00000394440 IGKV1-39P01597 117 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 IGKV1D-39P04432 117 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 MUC15Q8N387 334 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 GALNT11Q8NCW6 608 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 LIN7CQ9NUP9 197 aaKnown RBP12.4□□□□□ -0.42
CCT4-201ENST00000394440 CALYQ9NYX4 217 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 PPIAL4EA0A075B759 164 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 PPIAL4DF5H284 164 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 PPIAL4FP0DN26 164 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 UBA52P62987 128 aaKnown RBP12.4□□□□□ -0.42
CCT4-201ENST00000394440 ZNF585BQ52M93 769 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 OR8H3Q8N146 312 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 ST8SIA2Q92186 375 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 SPIN2AQ99865 258 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 SPIN2BQ9BPZ2 258 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.42
CCT4-201ENST00000394440 YPEL1O60688 119 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms