RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 RPS16P62249 146 aaKnown RBP9.36□□□□□ -0.91
TCOF1-203ENST00000394269 OR13A1Q8NGR1 328 aa9.36□□□□□ -0.91
TCOF1-203ENST00000394269 GNG12Q9UBI6 72 aa9.36□□□□□ -0.91
TCOF1-203ENST00000394269 Q9UFV3 132 aa9.36□□□□□ -0.91
TCOF1-203ENST00000394269 TRGV8A0A0C4DH27 118 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 ABCD4O14678 606 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 CDS2O95674 445 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 HEXAP06865 529 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 VDAC1P21796 283 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 TBR1Q16650 682 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 SLC25A24Q6NUK1 477 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 PHYHIPLQ96FC7 376 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 CACNG5Q9UF02 275 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 ABCA2Q9BZC7 2435 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 TGIF2LYQ8IUE0 185 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 OR2C3Q8N628 320 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 LEAP2Q969E1 77 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 MRPL37Q9BZE1 423 aaKnown RBP9.35□□□□□ -0.91
TCOF1-203ENST00000394269 WFDC1Q9HC57 220 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 PSG11Q9UQ72 335 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 A0A1W2PPE3 182 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 F12P00748 615 aaPredicted RBP9.35□□□□□ -0.91
TCOF1-203ENST00000394269 KITLGP21583 273 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 TIMP3P35625 211 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 MDH2P40926 338 aaKnown RBP9.35□□□□□ -0.91
TCOF1-203ENST00000394269 SRPXP78539 464 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
TCOF1-203ENST00000394269 ADAM5Q6NVV9 412 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 DRAM1Q8N682 238 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 CD177Q8N6Q3 437 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 COQ2Q96H96 371 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 SPIN2AQ99865 258 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 SPIN2BQ9BPZ2 258 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 ZDHHC8Q9ULC8 765 aa9.35□□□□□ -0.91
TCOF1-203ENST00000394269 JTBO76095 146 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 CYB5R3P00387 301 aaPredicted RBP9.34□□□□□ -0.91
TCOF1-203ENST00000394269 FGF2P09038 288 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 M6PRP20645 277 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 CD80P33681 288 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 EIF5AP63241 154 aaKnown RBP9.34□□□□□ -0.91
TCOF1-203ENST00000394269 ATRAIDQ6UW56 229 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 DMBX1Q8NFW5 382 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 GPR146Q96CH1 333 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 PLEKHA2Q9HB19 425 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 DCAF16Q9NXF7 216 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 WIPI2Q9Y4P8 454 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 CHD3Q12873 2000 aaKnown RBP9.34□□□□□ -0.91
TCOF1-203ENST00000394269 BORCS7-ASMTA0A0B4J1R7 106 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 C16orf97H3BN30 126 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 PRB1P04280 392 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 LPAR6P43657 344 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 Q6ZRG5 221 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 Q6ZRM9 215 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 Q6ZS49 121 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 LRTM2Q8N967 370 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 Q8NA96 180 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 TCTEX1D2Q8WW35 142 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 SFXN3Q9BWM7 321 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 PLEKHF2Q9H8W4 249 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 RAMP3O60896 148 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 EWSR1Q01844 656 aaKnown RBP eCLIP9.34□□□□□ -0.91
TCOF1-203ENST00000394269 TMEM267Q0VDI3 215 aaPredicted RBP9.34□□□□□ -0.91
TCOF1-203ENST00000394269 OR5C1Q8NGR4 320 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 STOML3Q8TAV4 291 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 TMEM56Q96MV1 263 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 NUP50Q9UKX7 468 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 POMT1Q9Y6A1 747 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 TMEM56-RWDD3S4R434 201 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 LRBAP50851 2863 aa9.34□□□□□ -0.91
TCOF1-203ENST00000394269 ANKHD1Q8IWZ3 2542 aaKnown RBP9.33□□□□□ -0.92
TCOF1-203ENST00000394269 A8MXK9 166 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 KRBOX1C9JBD0 128 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 TAAR5O14804 337 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 GPR137BO60478 399 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 UCP1P25874 307 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 CD40P25942 277 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 GLRXP35754 106 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 TNFAIP6P98066 277 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-203ENST00000394269 DUX4L9Q6RFH8 374 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-203ENST00000394269 TMEM182Q6ZP80 229 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-203ENST00000394269 SSX9Q7RTT3 188 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 TMEM171Q8WVE6 324 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 BARX1Q9HBU1 254 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-203ENST00000394269 LPAR3Q9UBY5 353 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 PRELID1Q9Y255 219 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 IGSF23A1L1A6 192 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 F8W036 122 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 H0Y980 276 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 TMEM50AO95807 157 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 LYL1P12980 280 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 ZP3P21754 424 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 NFYBP25208 207 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 G6PCP35575 357 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 BLOC1S1P78537 153 aa9.33□□□□□ -0.92
TCOF1-203ENST00000394269 MBNL2Q5VZF2 373 aaKnown RBP9.33□□□□□ -0.92
TCOF1-203ENST00000394269 HSD17B13Q7Z5P4 300 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-203ENST00000394269 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms