RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ZFPL1O95159 310 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 MS4A6AQ9H2W1 248 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
USP49-203ENST00000394253 HYPMO75409 117 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 PSG9Q00887 426 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 TMEM160Q9NX00 188 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.52
USP49-203ENST00000394253 AGAP20933 346 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 SRD5A2P31213 254 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 MPLP40238 635 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 TSPOP30536 169 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 FAM53BQ14153 422 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 S100A7L2Q5SY68 101 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 GPR82Q96P67 336 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 ZNF430Q9H8G1 570 aaPredicted RBP11.83□□□□□ -0.52
USP49-203ENST00000394253 TNFSF18Q9UNG2 199 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 TMSB15BA0A087X1C1 80 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 A0A1W2PNR3 127 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
USP49-203ENST00000394253 RTP5Q14D33 572 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
USP49-203ENST00000394253 CXorf67Q86X51 503 aaPredicted RBP11.83□□□□□ -0.52
USP49-203ENST00000394253 SDHCQ99643 169 aaPredicted RBP11.83□□□□□ -0.52
USP49-203ENST00000394253 LINC01553A4QN01 128 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 LURAP1LQ8IV03 231 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 RBPJLQ9UBG7 517 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 QTRT1Q9BXR0 403 aaKnown RBP11.82□□□□□ -0.52
USP49-203ENST00000394253 INSIG2Q9Y5U4 225 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 NEU1Q99519 415 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 RGPD3A6NKT7 1758 aaPredicted RBP11.82□□□□□ -0.52
USP49-203ENST00000394253 RGPD4Q7Z3J3 1758 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 TNFAIP6P98066 277 aaPredicted RBP11.82□□□□□ -0.52
USP49-203ENST00000394253 OTPQ5XKR4 325 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 C16orf52Q8NHV5 167 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 SLC25A40Q8TBP6 338 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 NRSN2Q9GZP1 204 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 GGTLC3B5MD39 225 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 RTN4RL1Q86UN2 441 aaPredicted RBP11.82□□□□□ -0.52
USP49-203ENST00000394253 OR2V1Q8NHB1 315 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 PAX2Q02962 417 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 NPVFQ9HCQ7 196 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 TSPAN2O60636 221 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 SRIP30626 198 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 LINC00518Q8N0U6 118 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 TTC9CQ8N5M4 171 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 BAHD1Q8TBE0 780 aaPredicted RBP11.82□□□□□ -0.52
USP49-203ENST00000394253 SLC26A1Q9H2B4 701 aa11.82□□□□□ -0.52
USP49-203ENST00000394253 LGALS1P09382 135 aaKnown RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 C1QTNF12Q5T7M4 302 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 PCGF1Q9BSM1 259 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 WSB2Q9NYS7 404 aaPredicted RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 PQLC2LA1A4F0 135 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 MAJINQ3KP22 176 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 SARGQ9BW04 601 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 RBBP6Q7Z6E9 1792 aaKnown RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 SNED1Q8TER0 1413 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 IGHV3-15A0A0B4J1V0 119 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 HOXA3O43365 443 aaPredicted RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 SBK3P0C264 359 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 PRICKLE4Q2TBC4 344 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 LHX8Q68G74 356 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 MRGPRDQ8TDS7 321 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 FGF13Q92913 245 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 A0A1W2PR48 441 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 PXNP49023 591 aaPredicted RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 MBNL2Q5VZF2 373 aaKnown RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 DEFB127Q9H1M4 99 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 RAE1P78406 368 aaKnown RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP49-203ENST00000394253 CEACAM16Q2WEN9 425 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 CYB5R2Q6BCY4 276 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 PQLC2Q6ZP29 291 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 C10orf111Q8N326 155 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 TM4SF19Q96DZ7 209 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 ASB16Q96NS5 453 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 CXXC4Q9H2H0 198 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 NPFFO15130 113 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 SYNGR1O43759 233 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 NXPH1P58417 271 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 HBBP68871 147 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 C12orf76Q8N812 135 aaPredicted RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 MEGF9Q9H1U4 602 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 ZNF275Q9NSD4 429 aaPredicted RBP11.81□□□□□ -0.52
USP49-203ENST00000394253 PPYP01298 95 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 SELENOPP49908 381 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 MRGPRFQ96AM1 343 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 PIMREGQ9BSJ6 248 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 SH3BGRL3Q9H299 93 aa11.81□□□□□ -0.52
USP49-203ENST00000394253 MKRN2OSH3BPM6 223 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 PLNP26678 52 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 NR2C2APQ86WQ0 139 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 ADRA2AP08913 450 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 ZNF56Q15929 161 aa11.8□□□□□ -0.52
USP49-203ENST00000394253 TMEM211Q6ICI0 200 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms