RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 AMBNQ9NP70 447 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 OR2S2Q9NQN1 319 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 MBNL3Q9NUK0 354 aaKnown RBP11.81□□□□□ -0.52
CHMP3-202ENST00000393773 JPT1Q9UK76 154 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 ORC6Q9Y5N6 252 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 GMPPBQ9Y5P6 360 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 FRAS1Q86XX4 4008 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 SAA2-SAA4A0A096LPE2 208 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 MCRIP1C9JLW8 97 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 HSPA12AO43301 675 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 IGLV1-51P01701 117 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 SAA2P0DJI9 122 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-202ENST00000393773 PPP1CCP36873 323 aaKnown RBP11.8□□□□□ -0.52
CHMP3-202ENST00000393773 OR3A3P47888 321 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 ALDH3A2P51648 485 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 LRRC36Q1X8D7 754 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 CCDC58Q4VC31 144 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 LIN54Q6MZP7 749 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 RPL22L1Q6P5R6 122 aaKnown RBP11.8□□□□□ -0.52
CHMP3-202ENST00000393773 TCTEX1D1Q8N7M0 179 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 OR52L2PQ8NGH6 319 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 OR13C5Q8NGS8 318 aa11.8□□□□□ -0.52
CHMP3-202ENST00000393773 MRPS18AQ9NVS2 196 aaKnown RBP11.8□□□□□ -0.52
CHMP3-202ENST00000393773 EGR2P11161 476 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-202ENST00000393773 FSTP19883 344 aa11.79□□□□□ -0.52
CHMP3-202ENST00000393773 RHOXF1Q8NHV9 184 aa11.79□□□□□ -0.52
CHMP3-202ENST00000393773 KIAA1456Q9P272 454 aa11.79□□□□□ -0.52
CHMP3-202ENST00000393773 STUB1Q9UNE7 303 aa11.79□□□□□ -0.52
CHMP3-202ENST00000393773 TRAV8-7A0A075B6U6 113 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 TRBV5-5A0A0J9YX44 114 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 CA11O75493 328 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 GPX5O75715 221 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 CX3CL1P78423 397 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 GPR176Q14439 515 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 LY6G6FQ5SQ64 297 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 ZNF660Q6AZW8 331 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-202ENST00000393773 SIGIRRQ6IA17 410 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 PYHIN1Q6K0P9 492 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 FAM71F2Q6NXP2 309 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 CD200R1LQ6Q8B3 271 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 FAM131AQ6UXB0 335 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 ZNF554Q86TJ5 538 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 SGPP2Q8IWX5 399 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
CHMP3-202ENST00000393773 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 PYDC1Q8WXC3 89 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 MUL1Q969V5 352 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 SMIM19Q96E16 107 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 MRPS24Q96EL2 167 aaKnown RBP11.78□□□□□ -0.52
CHMP3-202ENST00000393773 Q96M66 194 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 OR4C12Q96R67 309 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 SPATA25Q9BR10 227 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 IFI27L2Q9H2X8 130 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 FBXL15Q9H469 300 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 NKX1-2Q9UD57 310 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-202ENST00000393773 GAB2Q9UQC2 676 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 NUBP2Q9Y5Y2 271 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 PEX16Q9Y5Y5 336 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 A3GALT2U3KPV4 340 aa11.78□□□□□ -0.52
CHMP3-202ENST00000393773 FAM90A7PA6NKC0 464 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 FAM90A23PA8MXZ1 464 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 YPEL1O60688 119 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 LALBAP00709 142 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 HSPB1P04792 205 aaKnown RBP11.77□□□□□ -0.53
CHMP3-202ENST00000393773 HTD2P86397 168 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 OR2G6Q5TZ20 316 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 FLYWCH2Q96CP2 140 aaKnown RBP11.77□□□□□ -0.53
CHMP3-202ENST00000393773 Q96MT0 163 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 RDH12Q96NR8 316 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 YPEL2Q96QA6 119 aa11.77□□□□□ -0.53
CHMP3-202ENST00000393773 UBE2QL1A1L167 161 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 H3BNX3 289 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 RRHO14718 337 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 MAS1P04201 325 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 MGMTP16455 207 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 ETV1P50549 477 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 TPPP2P59282 170 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHMP3-202ENST00000393773 CBR4Q8N4T8 237 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 RHOVQ96L33 236 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 THAP7Q9BT49 309 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-202ENST00000393773 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
CHMP3-202ENST00000393773 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 SELENOIQ9C0D9 397 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 BANF2Q9H503 90 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 FGF20Q9NP95 211 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-202ENST00000393773 ERGIC3Q9Y282 383 aa11.76□□□□□ -0.53
CHMP3-202ENST00000393773 RPL36Q9Y3U8 105 aaKnown RBP11.76□□□□□ -0.53
CHMP3-202ENST00000393773 FCN1O00602 326 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 OGG1O15527 345 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 GLAP06280 429 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 SNRPBP14678 240 aaKnown RBP11.75□□□□□ -0.53
CHMP3-202ENST00000393773 FUT3P21217 361 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 HMGN3Q15651 99 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 HAGHQ16775 308 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 ACTBL2Q562R1 376 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 AWAT2Q6E213 333 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms