RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 C2orf50Q96LR7 162 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 NMES1Q9C002 83 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 TMEM222Q9H0R3 208 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 PSG11Q9UQ72 335 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 FLNCQ14315 2725 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 YLPM1P49750 1951 aaKnown RBP7.16□□□□□ -1.26
TDP1-203ENST00000393454 ZNF462Q96JM2 2506 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 DSCAML1Q8TD84 2053 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 TRAV14DV4A0A0A6YYC5 116 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 KBTBD11-OT1A0A1B0GTJ5 212 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 L7N2F9 121 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 DVL1O14640 695 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 ST8SIA5O15466 376 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 NDUFA2O43678 99 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 DANCRP0C864 163 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 IGFBP2P18065 325 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 F2RP25116 425 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 NFYBP25208 207 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 C17orf58Q2M2W7 97 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 CR1LQ2VPA4 569 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 AVPI1Q5T686 147 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 C11orf71Q6IPW1 123 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 DRAM1Q8N682 238 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 ZNF645Q8N7E2 425 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 LHFPL5Q8TAF8 219 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 NEU4Q8WWR8 484 aaPredicted RBP7.16□□□□□ -1.26
TDP1-203ENST00000393454 EDARADDQ8WWZ3 215 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 ABHD14BQ96IU4 210 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 CLN8Q9UBY8 286 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 JPT1Q9UK76 154 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 H0Y980 276 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 F2RL2O00254 374 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 TNFRSF13BO14836 293 aaPredicted RBP7.15□□□□□ -1.26
TDP1-203ENST00000393454 PPIHO43447 177 aaKnown RBP7.15□□□□□ -1.26
TDP1-203ENST00000393454 C1QL1O75973 258 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 MPC2O95563 127 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 IGLV2-14P01704 120 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 SERPINE2P07093 398 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 DAOP14920 347 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 PSMB6P28072 239 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 AP2S1P53680 142 aaPredicted RBP7.15□□□□□ -1.26
TDP1-203ENST00000393454 S100A10P60903 97 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 RPL31P62899 125 aaKnown RBP7.15□□□□□ -1.26
TDP1-203ENST00000393454 MORN2Q502X0 79 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 C11orf87Q6NUJ2 197 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 ZNF546Q86UE3 836 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 DTX2Q86UW9 622 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 FAM219AQ8IW50 185 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 FOXRED2Q8IWF2 684 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 SELENOHQ8IZQ5 122 aaKnown RBP7.15□□□□□ -1.26
TDP1-203ENST00000393454 SLC35G3Q8N808 338 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 LRTM2Q8N967 370 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 C18orf12Q96KH6 178 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 TOLLIPQ9H0E2 274 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 C19orf12Q9NSK7 152 aa7.15□□□□□ -1.26
TDP1-203ENST00000393454 SPTAN1Q13813 2472 aaKnown RBP7.15□□□□□ -1.26
TDP1-203ENST00000393454 ZNF729A6NN14 1252 aaPredicted RBP7.15□□□□□ -1.27
TDP1-203ENST00000393454 RNF212BA8MTL3 300 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 HMSDA8MTL9 139 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 YPEL1O60688 119 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 SCGB1D2O95969 90 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 RNF224P0DH78 156 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 CGB3P0DN86 165 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 CGB7P0DN87 165 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 CXCL2P19875 107 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 CDKN1AP38936 164 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 GPR12P47775 334 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 IFITM2Q01629 132 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 MEF2CQ06413 473 aaPredicted RBP7.15□□□□□ -1.27
TDP1-203ENST00000393454 BTNL3Q6UXE8 466 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 TCF23Q7RTU1 214 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 ZBTB34Q8NCN2 500 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 LEAP2Q969E1 77 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 TMEM56Q96MV1 263 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 YPEL2Q96QA6 119 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 MFFQ9GZY8 342 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 PLEKHF2Q9H8W4 249 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 IDI2-AS1Q9NZ38 188 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 CTSZQ9UBR2 303 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 LINC00312Q9Y6C7 94 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 TMEM56-RWDD3S4R434 201 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 ARID1AO14497 2285 aa7.15□□□□□ -1.27
TDP1-203ENST00000393454 RP2O75695 350 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 SNAPC5O75971 98 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 CDS2O95674 445 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 SLC25A4P12235 298 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 C4BPBP20851 252 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 UCP1P25874 307 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 LOXL3P58215 753 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 ZNF273Q14593 569 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 Q3ZCU0 254 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 PRAMEF5Q5TYX0 476 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 RNASE11Q8TAA1 199 aaKnown RBP7.14□□□□□ -1.27
TDP1-203ENST00000393454 DCUN1D4Q92564 292 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 CORO2AQ92828 525 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 RAB1CQ92928 201 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 RBPMSQ93062 196 aaKnown RBP7.14□□□□□ -1.27
TDP1-203ENST00000393454 TIMD4Q96H15 378 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 GAL3ST2Q9H3Q3 398 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 SLA2Q9H6Q3 261 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms