RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TESK1Q15569 626 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 NCMAPQ5T1S8 102 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 C1orf174Q8IYL3 243 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 OR4A4PQ8NGN8 299 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 OR10J5Q8NHC4 309 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 CA5BP1Q8WTZ4 195 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 FAM122AQ96E09 287 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 EGLN1Q9GZT9 426 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 NAA60Q9H7X0 242 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
MKS1-202ENST00000393119 TRBV6-6A0A0A6YYG2 114 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 NUDT19A8MXV4 375 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 OMGP23515 440 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 NPBWR1P48145 328 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 LINC00205P59089 165 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 SRSF3P84103 164 aaKnown RBP12.5□□□□□ -0.41
MKS1-202ENST00000393119 TMEM187Q14656 261 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 AVPI1Q5T686 147 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 TBC1D26Q86UD7 250 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 FAM90A1Q86YD7 464 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 RXFP4Q8TDU9 374 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 SEC11CQ9BY50 192 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 RHOFQ9HBH0 211 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 VPS13CQ709C8 3753 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 CACNA1BQ00975 2339 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 ZNF737O75373 536 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 IGLV2-14P01704 120 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 GYPAP02724 150 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 CEACAM6P40199 344 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 TLE1Q04724 770 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 H1FOOQ8IZA3 346 aaPredicted RBP12.49□□□□□ -0.41
MKS1-202ENST00000393119 SPAG16Q8N0X2 631 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 OR10V1Q8NGI7 309 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 ZNF471Q9BX82 626 aaPredicted RBP12.49□□□□□ -0.41
MKS1-202ENST00000393119 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 TACC2O95359 2948 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 USP24Q9UPU5 2620 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 HSPA12AO43301 675 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 DIRAS3O95661 229 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 GLAP06280 429 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 OR8U9P0C7N5 309 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 GNLYP22749 145 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 ERVFRD-1P60508 538 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 GGNBP1Q5YKI7 109 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 FIP1L1Q6UN15 594 aaKnown RBP12.49□□□□□ -0.41
MKS1-202ENST00000393119 OR8U1Q8NH10 309 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 CCL13Q99616 98 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 RNF126Q9BV68 326 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 RIMS4Q9H426 269 aaPredicted RBP12.49□□□□□ -0.41
MKS1-202ENST00000393119 MBNL3Q9NUK0 354 aaKnown RBP12.49□□□□□ -0.41
MKS1-202ENST00000393119 OR5AC2Q9NZP5 309 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 PPP1R3CQ9UQK1 317 aa12.49□□□□□ -0.41
MKS1-202ENST00000393119 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 MPPED1O15442 326 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 HABP2Q14520 560 aaPredicted RBP12.48□□□□□ -0.41
MKS1-202ENST00000393119 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
MKS1-202ENST00000393119 MST1LQ2TV78 715 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 FAM216BQ8N7L0 139 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 THAP6Q8TBB0 222 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 MSI2Q96DH6 328 aaKnown RBP12.48□□□□□ -0.41
MKS1-202ENST00000393119 SEBOXQ9HB31 216 aaPredicted RBP12.48□□□□□ -0.41
MKS1-202ENST00000393119 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 IL19Q9UHD0 177 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 DSCAMO60469 2012 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 TMEM30CPA0ZSE6 113 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 COLCA2A8K830 154 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 LYNX1G3V0Z9 82 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 ZG16O60844 167 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 HBZP02008 142 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 LYNX1P0DP58 116 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
MKS1-202ENST00000393119 AKR1C2P52895 323 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 EDDM3BP56851 147 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 AKR1C1Q04828 323 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 RAB32Q13637 225 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 ZNF565Q8N9K5 539 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 RNASE6Q93091 150 aaKnown RBP12.48□□□□□ -0.41
MKS1-202ENST00000393119 PIK3IP1Q96FE7 263 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 OR2W1Q9Y3N9 320 aa12.48□□□□□ -0.41
MKS1-202ENST00000393119 C5orf52A6NGY3 159 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 FABP1P07148 127 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 MDH2P40926 338 aaKnown RBP12.47□□□□□ -0.41
MKS1-202ENST00000393119 HMGN3Q15651 99 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 IZUMO4Q1ZYL8 232 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 CCL17Q92583 94 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 RRNAD1Q96FB5 475 aaKnown RBP12.47□□□□□ -0.41
MKS1-202ENST00000393119 CABLES2Q9BTV7 478 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 RAB18Q9NP72 206 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 RNF7Q9UBF6 113 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 C3orf85A0A1B0GTC6 90 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 UBE2CO00762 179 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 NXPH3O95157 252 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 S100A8P05109 93 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 FAM157CP0CG43 387 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 UCP3P55916 312 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 SWI5Q1ZZU3 235 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 NANPQ8TBE9 248 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms