RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FCER1GP30273 86 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 DAP3P51398 398 aaKnown RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 SLC35B1P78383 322 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 DEFB110Q30KQ9 67 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 DMRTC1Q5HYR2 192 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 LCN12Q6JVE5 192 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 OR52N5Q8NH56 324 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 PERPQ96FX8 193 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 YPEL4Q96NS1 127 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 MCTS1Q9ULC4 181 aaKnown RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 PXMP4Q9Y6I8 212 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 TMEM265A0A087WTH1 108 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SHISA7A6NL88 538 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 F5H5K5 113 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF324O75467 553 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 GP1BBP13224 206 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 RPS4XP62701 263 aaKnown RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 DUSP2Q05923 314 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF324BQ6AW86 544 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 MRPL21Q7Z2W9 205 aaKnown RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 OR5D13Q8NGL4 314 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 DNASE2BQ8WZ79 361 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CLDN23Q96B33 292 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SPSB1Q96BD6 273 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 KCNS1Q96KK3 526 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 OR4C12Q96R67 309 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 RAB40CQ96S21 281 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 PLA2G2EQ9NZK7 142 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SPTBN2O15020 2390 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CTXND1A0A1B0GTU2 59 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 IGSF23A1L1A6 192 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 GAGE12HA6NDE8 117 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 OTOL1A6NHN0 477 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SPINT1O43278 529 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 GPX1P07203 203 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 GPR183P32249 361 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CCR5P51681 352 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 MORN2Q502X0 79 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 RBM24Q9BX46 236 aaKnown RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 NCOR1O75376 2440 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CACNA1IQ9P0X4 2223 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 IGHV2-26A0A0B4J1V2 119 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 C3orf85A0A1B0GTC6 90 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CRYM-AS1A6NIL9 109 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SNAI2O43623 268 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 APCSP02743 223 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 PVRP15151 417 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SUPT4H1P63272 117 aaKnown RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 RPL18Q07020 188 aaKnown RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 DLX2Q07687 328 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 MALLQ13021 153 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 TMEM249Q2WGJ8 235 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CD300EQ496F6 205 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 DNM1P46Q6ZS02 220 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 OR1K1Q8NGR3 316 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 OR51H1Q8NH63 302 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 OR51E1Q8TCB6 317 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 TMEM70Q9BUB7 260 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 MAP1LC3CQ9BXW4 147 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 TECRQ9NZ01 308 aaKnown RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 COA3Q9Y2R0 106 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SCN5AQ14524 2016 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 PPIAL4EA0A075B759 164 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 IGLC7A0M8Q6 106 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 G3V4G9 280 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 PPIAL4FP0DN26 164 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CPMP14384 443 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CA7P43166 264 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 ACSF3Q4G176 576 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-201ENST00000393077 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 SSX8Q7RTT4 187 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 OR8B2Q96RD0 313 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 PLA2G2FQ9BZM2 168 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 FGF22Q9HCT0 170 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 MMP25Q9NPA2 562 aa6.61□□□□□ -1.35
VTI1A-201ENST00000393077 CENPFP49454 3210 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 FAM186AA6NE01 2351 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 PRSS38A1L453 326 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 ALG1L2C9J202 215 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 POU2F2P09086 479 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 EGR1P18146 543 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 MNX1P50219 401 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 C1orf100Q5SVJ3 147 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 FDX2Q6P4F2 183 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 WDR82Q6UXN9 313 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 MUC15Q8N387 334 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 SERGEFQ9UGK8 458 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 PSG11Q9UQ72 335 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF257Q9Y2Q1 563 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 YTHDF2Q9Y5A9 579 aaKnown RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 MED12Q93074 2177 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 FAM231BA6NCW3 169 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 C9orf172C9J069 976 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 NRG2O14511 850 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-201ENST00000393077 THY1P04216 161 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 CLDN15P56746 228 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 SEC11AP67812 179 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 HHEXQ03014 270 aa6.6□□□□□ -1.35
VTI1A-201ENST00000393077 CXorf66Q5JRM2 361 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms