RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SMIM21Q3B7S5 101 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM176BQ3YBM2 270 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF404Q494X3 552 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 COX19Q49B96 90 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 TFDP3Q5H9I0 405 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 SDHAF4Q5VUM1 108 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 DNM1P34Q6PK57 102 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CEMP1Q6PRD7 247 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ARL9Q6T311 187 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PLET1Q6UQ28 207 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 VTCN1Q7Z7D3 282 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 RBM45Q8IUH3 476 aaKnown RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 SAXO1Q8IYX7 474 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 H1FOOQ8IZA3 346 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 SELENOHQ8IZQ5 122 aaKnown RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CYB561A3Q8NBI2 242 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ATP6V1C2Q8NEY4 427 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR10G2Q8NGC3 310 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR9G4Q8NGQ1 327 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR13C9Q8NGT0 318 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR11L1Q8NGX0 322 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR8U1Q8NH10 309 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR51F2Q8NH61 342 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 OR1S1Q8NH92 325 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 GPX8Q8TED1 209 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF431Q8TF32 576 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CA5BP1Q8WTZ4 195 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ABHD3Q8WU67 409 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 EEF1AKMT3Q96AZ1 226 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 CERS2Q96G23 380 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 SMARCD1Q96GM5 515 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 JSRP1Q96MG2 331 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF681Q96N22 645 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 YPEL4Q96NS1 127 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 PHB2Q99623 299 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 AIF1LQ9BQI0 150 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 UTP23Q9BRU9 249 aaKnown RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 RSG1Q9BU20 258 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 SNHG12Q9BXW3 62 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 SEC11CQ9BY50 192 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ARV1Q9H2C2 271 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF430Q9H8G1 570 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM9BQ9NQ34 198 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 USE1Q9NZ43 259 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 C3orf18Q9UK00 162 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 MCTS1Q9ULC4 181 aaKnown RBP1.92□□□□□ -2.1
PTPRC-205ENST00000391970 POFUT2Q9Y2G5 429 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 HSPB11Q9Y547 144 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 ARL5AQ9Y689 179 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 V9GYS6 101 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 NHSQ6T4R5 1651 aa1.92□□□□□ -2.1
PTPRC-205ENST00000391970 TNS2Q63HR2 1409 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 LRP4O75096 1905 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 ANK1P16157 1881 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 A0A096LPI6 279 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 NCBP2LA6PVI3 153 aaKnown RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 HMSDA8MTL9 139 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 SUPT3HB4E1H0 165 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 C5orf58C9J3I9 102 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 D6RAR5 112 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 PRAMEF26H0Y7S4 382 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 M0R143 59 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 AIREO43918 545 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 CDC40O60508 579 aaKnown RBP eCLIP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 GLSO94925 669 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 SLC25A14O95258 325 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 HPRT1P00492 218 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TCRBP04435 133 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 OR5AC1P0C628 307 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 OR10J4P0C629 311 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 UBCP0CG48 685 aaKnown RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 IGHV1-8P0DP01 117 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 UGT2B7P16662 529 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF25P17030 456 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 GSTM3P21266 225 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 BGNP21810 368 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TUBG1P23258 451 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 MYL9P24844 172 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 HTR2CP28335 458 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 SSTR5P35346 364 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 RAB11AP62491 216 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 DYNLL1P63167 89 aaKnown RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 HBA1P69905 142 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 ARG2P78540 354 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 PRR3P79522 188 aaKnown RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 PITPNAQ00169 270 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 JOSD1Q15040 202 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 RGNQ15493 299 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 RAB11BQ15907 218 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TAF9Q16594 264 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 UBE2SQ16763 222 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM249Q2WGJ8 235 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 C5orf47Q569G3 176 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 BEX5Q5H9J7 111 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 FAM74A1Q5RGS3 127 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 HIST2H3PS2Q5TEC6 136 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 PLCXD3Q63HM9 321 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 H3F3CQ6NXT2 135 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 SMARCD3Q6STE5 483 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms