RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 NPYP01303 97 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PTMAP06454 111 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 BPGMP07738 259 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 UBCP0CG48 685 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 RNASE3P12724 160 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SPNP16150 400 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 ZNF3P17036 446 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PSMB8P28062 276 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PPP1CCP36873 323 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CLDN18P56856 261 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 HIST1H4AP62805 103 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CEACAM16Q2WEN9 425 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PQLC3Q8N755 202 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CA5BP1Q8WTZ4 195 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CRACR2AQ9BSW2 395 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 C11orf49Q9H6J7 331 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 METTL17Q9H7H0 456 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 GMEB1Q9Y692 573 aa-0.67□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PTPRBP23467 1997 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 STAB1Q9NY15 2570 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 RBFOX3A6NFN3 312 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 B4DEV8 164 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CPLX1O14810 134 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PHYHO14832 338 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CPN2P22792 545 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 KDELR1P24390 212 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PSMA1P25786 263 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TSPOP30536 169 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TTPAP49638 278 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 GABARAPL2P60520 117 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CARD17Q5XLA6 110 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 Q6ZS92 163 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 FAM19A3Q7Z5A8 133 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 LUZP2Q86TE4 346 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CA13Q8N1Q1 262 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 OR4P4Q8NGL7 312 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 AKR7LQ8NHP1 331 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 NELFBQ8WX92 580 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TAMM41Q96BW9 452 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 NXF2Q9GZY0 626 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TMEM185BQ9H7F4 350 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 UNC79Q9P2D8 2635 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 BLOC1S6Q9UL45 172 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 HHLA2Q9UM44 414 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TIMM9Q9Y5J7 89 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 ABCB11O95342 1321 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 MED12LQ86YW9 2145 aa-0.68□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PEAK1Q9H792 1746 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TRAV14DV4A0A0A6YYC5 116 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 LINC00862A6NCI5 91 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 C19orf84I3L1E1 186 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SIVA1O15304 175 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CIB2O75838 187 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 NDUFB2O95178 105 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SPINK1P00995 79 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 IFNGR2P38484 337 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 ACTR1BP42025 376 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 GCLMP48507 274 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 DNASE1L1P49184 302 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 MP68P56378 58 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 RAB2AP61019 212 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SLC35B1P78383 322 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TMEM267Q0VDI3 215 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PLCXD3Q63HM9 321 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 FAM173BQ6P4H8 233 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 GAPTQ8N292 157 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 Q8N814 137 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CNEP1R1Q8N9A8 125 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SMCR5Q8TEV8 140 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TSEN15Q8WW01 171 aaKnown RBP-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 ASB13Q8WXK3 278 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 OR8D1Q8WZ84 308 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 ISOC2Q96AB3 205 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CMTM5Q96DZ9 223 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TMA16Q96EY4 203 aaKnown RBP-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CHID1Q9BWS9 393 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 JPT1Q9UK76 154 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SMARCA4P51532 1647 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 NAV1Q8NEY1 1877 aa-0.69□□□□□ -2.52
RNU6-1228P-201ENST00000391014 IGHV1-18A0A0C4DH31 117 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 A0A1W2PRF3 423 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 A0A1W2PRM7 423 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CTAGE15A4D2H0 777 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 FAM183AA6NL82 134 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 CENPXA8MT69 81 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 OR11H12B2RN74 326 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TXNDC9O14530 226 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 FGF16O43320 207 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PDCD6O75340 191 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TRAPPC6AO75865 159 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SHBGP04278 402 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 GSTM3P21266 225 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TAS2R45P59539 299 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 TAS2R30P59541 319 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 FAM3AP98173 230 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PAFAH1B3Q15102 231 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 PDGFRLQ15198 375 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 SPANXN2Q5MJ10 180 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 ARMC12Q5T9G4 340 aa-0.7□□□□□ -2.52
RNU6-1228P-201ENST00000391014 EBLN2Q6P2I7 272 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms