RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 KCNE3Q9Y6H6 103 aa2.73□□□□□ -1.97
TRAJ17-201ENST00000390520 REREQ9P2R6 1566 aa2.73□□□□□ -1.97
TRAJ17-201ENST00000390520 FNDC1Q4ZHG4 1894 aaPredicted RBP2.73□□□□□ -1.97
TRAJ17-201ENST00000390520 NFASCO94856 1347 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 FYCO1Q9BQS8 1478 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 CEP164Q9UPV0 1460 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ADAMTSL1Q8N6G6 1762 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 IGKV1D-8A0A087WSZ0 117 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 TRAV8-2A0A0B4J237 113 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 TRAV5A0A0B4J249 113 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 GAGE12BA1L429 117 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 C5orf49A4QMS7 147 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 GAGE12HA6NDE8 117 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZNF705EA8MWA4 302 aaPredicted RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 LY6LH3BQJ8 138 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 J3QR89 54 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 CDC42EP2O14613 210 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 OVOL1O14753 267 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 TECPR2O15040 1411 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZNHIT1O43257 154 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 LMX1BO60663 402 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 NDUFB8O95169 186 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 DUS4LO95620 317 aaKnown RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 CXorf1O96002 111 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 GYPCP04921 128 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 SOD3P08294 240 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZSCAN5DPP0CG00 497 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 AKAIN1P0CW23 69 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 P0DMU3 169 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 FAM231AP0DMU4 169 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 FAM231CP0DMU5 169 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 LINC00694P0DN24 101 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 SPNP16150 400 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 HIST1H1DP16402 221 aaKnown RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZNF19P17023 458 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 USP6P35125 1406 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZNF140P52738 457 aaPredicted RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 SLC25A1P53007 311 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 GP2P55259 537 aaKnown RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 UBE2NP61088 152 aaKnown RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 HOXC5Q00444 222 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 SLC38A11Q08AI6 406 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 JOSD1Q15040 202 aaPredicted RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 NRF1Q16656 503 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 NSUN5P1Q3KNT7 163 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZNF718Q3SXZ3 478 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 LINC00242Q5T6M2 205 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 BCL2L15Q5TBC7 163 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZNF57Q68EA5 555 aaPredicted RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 KDM4DQ6B0I6 523 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 AMMECR1LQ6DCA0 310 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 HRCT1Q6UXD1 115 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 SCGB1D4Q6XE38 83 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 GTF2H5Q6ZYL4 71 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 MOB1BQ7L9L4 216 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 DENND4AQ7Z401 1863 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 TMEM179BQ7Z7N9 219 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 PIP4P1Q86T03 277 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 CDC20BQ86Y33 519 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 NPWQ8N729 165 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 RBMXL3Q8N7X1 1067 aaKnown RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 SAMD12Q8N8I0 201 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ZNF441Q8N8Z8 693 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 FER1L6-AS1Q8NA97 138 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 C5orf17Q8NAS9 161 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 OR10AD1Q8NGE0 317 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 OR51A4Q8NGJ6 313 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 Q8TCH9 128 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 TMEM131Q92545 1883 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 FGF11Q92914 225 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 MBD6Q96DN6 1003 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 C2orf48Q96LS8 159 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 MEIS3Q99687 375 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 TMEM147Q9BVK8 224 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 MOB1AQ9H8S9 216 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 CXorf21Q9HAI6 301 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 PDFQ9HBH1 243 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 PARP11Q9NR21 331 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 MARCH5Q9NX47 278 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 LAMTOR3Q9UHA4 124 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 PCYOX1Q9UHG3 505 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 WASHC3Q9Y3C0 194 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 ITGB4P16144 1822 aa2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 N4BP2Q86UW6 1770 aaPredicted RBP2.72□□□□□ -1.97
TRAJ17-201ENST00000390520 NLRP1Q9C000 1473 aa2.71□□□□□ -1.97
TRAJ17-201ENST00000390520 LRRIQ1Q96JM4 1722 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 FRMPD1Q5SYB0 1578 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 DCCP43146 1447 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 ZSWIM8A7E2V4 1837 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 A0A0G2JMM0 328 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 A0A1W2PPB8 328 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 PLAC8L1A1L4L8 177 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 KIR3DP1A8MWS1 328 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 CLDN25C9JDP6 229 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 H0Y9J4 135 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 H7BYZ3 331 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 NPFFO15130 113 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 PGLYRP1O75594 196 aaPredicted RBP2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 SNAPC5O75971 98 aa2.71□□□□□ -1.98
TRAJ17-201ENST00000390520 KCNK2O95069 426 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms