RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ST3GAL6Q9Y274 331 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 LNP1A1A4G5 178 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 CNOT4O95628 575 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 NRASP01111 189 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 CCNOP22674 350 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 GFRA1P56159 465 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 H1FOOQ8IZA3 346 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 BORCS8Q96FH0 119 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 PPP1R14DQ9NXH3 145 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 PRSS50Q9UI38 385 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 VAX2Q9UIW0 290 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 POLR3KQ9Y2Y1 108 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 ZNF705FA8MVS1 300 aaPredicted RBP15.08■□□□□ 0
SQSTM1-202ENST00000389805 H7BYZ3 331 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 ZNF705DP0CH99 300 aaPredicted RBP15.08■□□□□ 0
SQSTM1-202ENST00000389805 ZNF705BP0CI00 300 aaPredicted RBP15.08■□□□□ 0
SQSTM1-202ENST00000389805 PAX9P55771 341 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 ZNF818PQ6ZRF7 136 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 GAPTQ8N292 157 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 SPIN2AQ99865 258 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 SPIN2BQ9BPZ2 258 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 FAM166BA8MTA8 275 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 DLEU1O43261 78 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 DNPH1O43598 174 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 SPINK2P20155 84 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 OR51G1Q8NGK1 321 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 OR10G4Q8NGN3 311 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 OR10J5Q8NHC4 309 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 OR5B12Q96R08 314 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 PLK3Q9H4B4 646 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 FKBP11Q9NYL4 201 aa15.08■□□□□ 0
SQSTM1-202ENST00000389805 NEURL1O76050 574 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 LINC00696Q6ZRV3 163 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 CALHM1Q8IU99 346 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 OR7C1O76099 320 aaPredicted RBP15.07■□□□□ 0
SQSTM1-202ENST00000389805 EDN3P14138 238 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 ID3Q02535 119 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 C10orf35Q96D05 121 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 CTDSP1Q9GZU7 261 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 CBY1Q9Y3M2 126 aa15.07■□□□□ 0
SQSTM1-202ENST00000389805 IAPPP10997 89 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 CEACAM1P13688 526 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 BSXQ3C1V8 233 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 CST9LP1Q5W188 147 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 PLPPR1Q8TBJ4 325 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 SCGB1C1Q8TD33 95 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 SPSB1Q96BD6 273 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 CFAP47Q6ZTR5 3102 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 A0A0G2JRQ6 117 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 HSPB6O14558 160 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 RAB4AP20338 218 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 TMEM241Q24JQ0 296 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 COL27A1Q8IZC6 1860 aaPredicted RBP15.06■□□□□ 0
SQSTM1-202ENST00000389805 METTL15P1P0C7V9 234 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 BAXQ07812 192 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 C3AR1Q16581 482 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 TUSC5Q8IXB3 177 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 TMEM256Q8N2U0 113 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 SPRY4Q9C004 299 aa15.06■□□□□ 0
SQSTM1-202ENST00000389805 AURKAIP1Q9NWT8 199 aaPredicted RBP15.06■□□□□ 0
SQSTM1-202ENST00000389805 IGKV1D-13A0A0B4J2D9 117 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 hCG_38984A0A1B0GV85 526 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 ZNF737O75373 536 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 IGKV1-13P0DP09 117 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 MAGEA5P43359 124 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 OR3A1P47881 315 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 FAM3BP58499 235 aaPredicted RBP15.05■□□□□ 0
SQSTM1-202ENST00000389805 IL24Q13007 206 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 COA6Q5JTJ3 125 aaKnown RBP15.05■□□□□ 0
SQSTM1-202ENST00000389805 PLCXD3Q63HM9 321 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 OR2M7Q8NG81 312 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 TMEM170AQ8WVE7 144 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 SDSLQ96GA7 329 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 CCL28Q9NRJ3 127 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 CRIM1Q9NZV1 1036 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 NAT8Q9UHE5 227 aa15.05■□□□□ 0
SQSTM1-202ENST00000389805 MRPL33O75394 65 aaKnown RBP15.05■□□□□ -0
SQSTM1-202ENST00000389805 IRF2P14316 349 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 UCP3P55916 312 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 RPL23P62829 140 aaKnown RBP15.05■□□□□ -0
SQSTM1-202ENST00000389805 EIF3IQ13347 325 aaKnown RBP15.05■□□□□ -0
SQSTM1-202ENST00000389805 CNN3Q15417 329 aaKnown RBP15.05■□□□□ -0
SQSTM1-202ENST00000389805 DMRTA1Q5VZB9 504 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 MYPOPQ86VE0 399 aaPredicted RBP15.05■□□□□ -0
SQSTM1-202ENST00000389805 OSR2Q8N2R0 312 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 R3HDM4Q96D70 268 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 TMEM56Q96MV1 263 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 STRADBQ9C0K7 418 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 TAAR3PQ9P1P4 343 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 TMEM56-RWDD3S4R434 201 aa15.05■□□□□ -0
SQSTM1-202ENST00000389805 TRAV1-1A0A0B4J248 108 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 MAP1LC3B2A6NCE7 125 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 NUPR1O60356 82 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 NPBWR2P48146 333 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 ARF1P84077 181 aaKnown RBP15.04■□□□□ -0
SQSTM1-202ENST00000389805 KRTAP27-1Q3LI81 207 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 TDRG1Q3Y452 100 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 NMSQ5H8A3 153 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 MAP1LC3BQ9GZQ8 125 aa15.04■□□□□ -0
SQSTM1-202ENST00000389805 ZNF503-AS2A6NEH8 195 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms