RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NDUFS5O43920 106 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TOM1O60784 492 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 GGCTO75223 188 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 NDUFB10O96000 172 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 LALBAP00709 142 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 APCSP02743 223 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CHRNGP07510 517 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 GUSBP08236 651 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ZDHHC11BP0C7U3 371 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 PIRTP0C851 137 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 IGHV3-30-3P0DP02 117 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 GADD45AP24522 165 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 PTPN6P29350 595 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 IFNGR2P38484 337 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 GABRA4P48169 554 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARPP19P56211 112 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 EIF5AP63241 154 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 RHOGP84095 191 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 GLO1Q04760 184 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 KLRB1Q12918 225 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRDNQ13061 729 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 DNAJC3Q13217 504 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CLINT1Q14677 625 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SYCP1Q15431 976 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ZNF56Q15929 161 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TPD52L1Q16890 204 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 Q1T7F1 81 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 NSUN5P1Q3KNT7 163 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 DUSP28Q4G0W2 176 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SPATA45Q537H7 98 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 C1orf137Q5JT78 98 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 HENMT1Q5T8I9 393 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR8G2PQ6IF36 304 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR2A2Q6IF42 318 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR6B2Q6IFH4 312 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 EIF5AL1Q6IS14 154 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SHQ1Q6PI26 577 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 C1orf228Q6PIY5 440 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 FAM159AQ6UWV7 190 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 LRRN1Q6UXK5 716 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 HSDL2Q6YN16 418 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 C7orf65Q6ZTY9 151 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 BBS7Q8IWZ6 715 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CD302Q8IX05 232 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCNYL1Q8N7R7 359 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCDC197Q8NCU1 140 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 NOXO1Q8NFA2 376 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4S1Q8NGB4 309 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4K17Q8NGC6 315 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR2T34Q8NGX1 318 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR2T3Q8NH03 318 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM239Q8WW34 195 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ST8SIA1Q92185 356 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARPC1AQ92747 370 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ADAT3Q96EY9 351 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 PLEKHA8Q96JA3 519 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CNDP2Q96KP4 475 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR8B2Q96RD0 313 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 DSCR8Q96T75 97 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 HIST1H4GQ99525 98 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SH3GL3Q99963 347 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CRB3Q9BUF7 120 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC25A23Q9BV35 468 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ULBP3Q9BZM4 244 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ROGDIQ9GZN7 287 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 NSRP1Q9H0G5 558 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 POMKQ9H5K3 350 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 UBE2ZQ9H832 354 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ZWILCHQ9H900 591 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 CSNK1G1Q9HCP0 422 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC35C2Q9NQQ7 365 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 NUDT15Q9NV35 164 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TECRQ9NZ01 308 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 WARS2Q9UGM6 360 aaKnown RBP-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 TAC3Q9UHF0 121 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC24A2Q9UI40 661 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC13A4Q9UKG4 626 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 SNX7Q9UNH6 387 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ST3GAL6Q9Y274 331 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ANKRD36A6QL64 1941 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 PATJQ8NI35 1801 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 DAPK1P53355 1430 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 FGD6Q6ZV73 1430 aa-1.92□□□□□ -2.72
RNU6-540P-201ENST00000384622 ERCC6L2Q5T890 1561 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 KDRP35968 1356 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 KIF15Q9NS87 1388 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 IGHV3OR15-7A0A075B7D8 119 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PRSS37A4D1T9 235 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 C5orf52A6NGY3 159 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR51F1A6NGY5 319 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SDR42E2A6NKP2 422 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 F5H768 121 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 H3BQ85 93 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 GOLGA8RI6L899 631 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 GPR171O14626 319 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PTGESO14684 152 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 POLR3GO15318 223 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 SYT7O43581 403 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 PLIN1O60240 522 aa-1.93□□□□□ -2.72
RNU6-540P-201ENST00000384622 ASS1P00966 412 aaKnown RBP-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms