RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 RNF212BA8MTL3 300 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 KRBOX1C9JBD0 128 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 SPRY3O43610 288 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 IGKV1-39P01597 117 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 IGKV1D-39P04432 117 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 SFTPCP11686 197 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 GALNT11Q8NCW6 608 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 MRGPRDQ8TDS7 321 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 BBC3Q96PG8 261 aaPredicted RBP16.07■□□□□ 0.16
GMDS-201ENST00000380805 ARID1AO14497 2285 aa16.07■□□□□ 0.16
GMDS-201ENST00000380805 DPRXA6NFQ7 191 aa16.06■□□□□ 0.16
GMDS-201ENST00000380805 PVALBP20472 110 aaPredicted RBP16.06■□□□□ 0.16
GMDS-201ENST00000380805 ZNF585BQ52M93 769 aa16.06■□□□□ 0.16
GMDS-201ENST00000380805 RND1Q92730 232 aa16.06■□□□□ 0.16
GMDS-201ENST00000380805 SAT2Q96F10 170 aaPredicted RBP16.06■□□□□ 0.16
GMDS-201ENST00000380805 GCM1Q9NP62 436 aa16.06■□□□□ 0.16
GMDS-201ENST00000380805 OR2S2Q9NQN1 319 aa16.06■□□□□ 0.16
GMDS-201ENST00000380805 FAM212BQ9NTI7 297 aaPredicted RBP16.06■□□□□ 0.16
GMDS-201ENST00000380805 RBM7Q9Y580 266 aaKnown RBP16.06■□□□□ 0.16
GMDS-201ENST00000380805 A0A0G2JRQ6 117 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 K7N7A8 449 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 CD55P08174 381 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 OR2C3Q8N628 320 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 OR52L2PQ8NGH6 319 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 SMIM8Q96KF7 97 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 DIRC2Q96SL1 478 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 LYRM2Q9NU23 88 aaPredicted RBP16.05■□□□□ 0.16
GMDS-201ENST00000380805 RNF7Q9UBF6 113 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 LPAR3Q9UBY5 353 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 KCNS2Q9ULS6 477 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 PPP1R3CQ9UQK1 317 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 RNF115Q9Y4L5 304 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 ODAMA1E959 279 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 KIAA1324LA8MWY0 1029 aaPredicted RBP16.05■□□□□ 0.16
GMDS-201ENST00000380805 NUDT19A8MXV4 375 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 GZMHP20718 246 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 TNFSF4P23510 183 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 SSTR5P35346 364 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 POLR2GP62487 172 aaKnown RBP eCLIP16.05■□□□□ 0.16
GMDS-201ENST00000380805 TNFAIP6P98066 277 aaPredicted RBP16.05■□□□□ 0.16
GMDS-201ENST00000380805 KLRB1Q12918 225 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 CXorf66Q5JRM2 361 aaPredicted RBP16.05■□□□□ 0.16
GMDS-201ENST00000380805 NINJ1Q92982 152 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 GPR146Q96CH1 333 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 SH3BGRL2Q9UJC5 107 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 SPTA1P02549 2419 aa16.05■□□□□ 0.16
GMDS-201ENST00000380805 DSCAML1Q8TD84 2053 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 RAB19A4D1S5 217 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 ABCD4O14678 606 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 ATXN7O15265 892 aaPredicted RBP16.04■□□□□ 0.16
GMDS-201ENST00000380805 SULT1A2P50226 295 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 EWSR1Q01844 656 aaKnown RBP eCLIP16.04■□□□□ 0.16
GMDS-201ENST00000380805 WFDC8Q8IUA0 241 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 TCTEX1D1Q8N7M0 179 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 OR1S2Q8NGQ3 325 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 SDSLQ96GA7 329 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 C5orf30Q96GV9 206 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 PLCE1Q9P212 2302 aa16.04■□□□□ 0.16
GMDS-201ENST00000380805 DSCAMO60469 2012 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 SPINT2O43291 252 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 BSPH1Q075Z2 132 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 ADIPOQQ15848 244 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 STUMQ69YW2 141 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 UQCC3Q6UW78 93 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 ZNF561Q8N587 486 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 TPRX1Q8N7U7 411 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 ARL11Q969Q4 196 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 BSCL2Q96G97 398 aaPredicted RBP16.03■□□□□ 0.16
GMDS-201ENST00000380805 LINC00052Q96N35 136 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 GINS3Q9BRX5 216 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 OR2D2Q9H210 308 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 WFDC1Q9HC57 220 aa16.03■□□□□ 0.16
GMDS-201ENST00000380805 BORCS7-ASMTA0A0B4J1R7 106 aa16.02■□□□□ 0.16
GMDS-201ENST00000380805 IGKV1-5P01602 117 aa16.02■□□□□ 0.16
GMDS-201ENST00000380805 AGMATQ9BSE5 352 aa16.02■□□□□ 0.16
GMDS-201ENST00000380805 JPT1Q9UK76 154 aa16.02■□□□□ 0.16
GMDS-201ENST00000380805 NUP50Q9UKX7 468 aa16.02■□□□□ 0.16
GMDS-201ENST00000380805 IGHV3OR15-7A0A075B7D8 119 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 IGSF23A1L1A6 192 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 F2RL2O00254 374 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 SEC11BP0C7V7 166 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 PPP1CCP36873 323 aaKnown RBP16.02■□□□□ 0.15
GMDS-201ENST00000380805 BAXQ07812 192 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 MST1LQ2TV78 715 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 STPG2Q8N412 459 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 MARC2Q969Z3 335 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 SLC25A31Q9H0C2 315 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 COA4Q9NYJ1 87 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 TAS2R3Q9NYW6 316 aa16.02■□□□□ 0.15
GMDS-201ENST00000380805 TANC2Q9HCD6 1990 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 RP1L1Q8IWN7 2480 aaPredicted RBP16.01■□□□□ 0.15
GMDS-201ENST00000380805 TEX46H3BTG2 121 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 SSSCA1O60232 199 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 TMEM50AO95807 157 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 CGB3P0DN86 165 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 CGB7P0DN87 165 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 NHLH2Q02577 135 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 CATR1Q13166 79 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 TEX36Q5VZQ5 186 aa16.01■□□□□ 0.15
GMDS-201ENST00000380805 Q6ZRM9 215 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms