RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TRBV5-7A0A0A0MS05 114 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 CELA2AP08217 269 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 RUNX1Q01196 453 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 UBE2V2Q15819 145 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 TMEM204Q9BSN7 226 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 A0A1W2PPE3 182 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 MPDU1O75352 247 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 HBZP02008 142 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 FGF5P12034 268 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 SNRNP40Q96DI7 357 aaKnown RBP13.9□□□□□ -0.18
COL2A1-202ENST00000380518 OR2V2Q96R30 315 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 DIRC2Q96SL1 478 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 DLEC1Q9Y238 1755 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 LTBP4Q8N2S1 1624 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 HOXD4P09016 255 aaPredicted RBP13.9□□□□□ -0.18
COL2A1-202ENST00000380518 STARD4Q96DR4 205 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 CCL8P80075 99 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 TPRX1Q8N7U7 411 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 ABHD14BQ96IU4 210 aa13.9□□□□□ -0.18
COL2A1-202ENST00000380518 HERVK_113P61574 105 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 SLC25A33Q9BSK2 321 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 UBTD1Q9HAC8 227 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 DCAF16Q9NXF7 216 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 OR10J1P30954 320 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 WNT5AP41221 380 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 REG1BP48304 166 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 KCNE5Q9UJ90 142 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 KCNMB2Q9Y691 235 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 MARF1Q9Y4F3 1742 aaKnown RBP13.89□□□□□ -0.19
COL2A1-202ENST00000380518 APCSP02743 223 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 CD81P60033 236 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 C1orf185Q5T7R7 199 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 CYB561D1Q8N8Q1 229 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 PRR7Q8TB68 274 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 ADIPOR1Q96A54 375 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 PAXXQ9BUH6 204 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 HYPMO75409 117 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 MUC1P15941 1255 aaPredicted RBP13.89□□□□□ -0.19
COL2A1-202ENST00000380518 MPV17P39210 176 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 RIPPLY2Q5TAB7 128 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 SCGB1D4Q6XE38 83 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 GCSAMQ8N6F7 178 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 SGMS2Q8NHU3 365 aa13.89□□□□□ -0.19
COL2A1-202ENST00000380518 AURKAIP1Q9NWT8 199 aaPredicted RBP13.89□□□□□ -0.19
COL2A1-202ENST00000380518 SMIM10L1P0DMW3 83 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 FAM3BP58499 235 aaPredicted RBP13.88□□□□□ -0.19
COL2A1-202ENST00000380518 WDFY1Q8IWB7 410 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 SMIM10Q96HG1 83 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF714Q96N38 554 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 TXNDC17Q9BRA2 123 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 SCTP09683 121 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 LBHQ53QV2 105 aaPredicted RBP13.88□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF660Q6AZW8 331 aaPredicted RBP13.88□□□□□ -0.19
COL2A1-202ENST00000380518 RBPMS2Q6ZRY4 209 aaKnown RBP13.88□□□□□ -0.19
COL2A1-202ENST00000380518 MIOXQ9UGB7 285 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 HSPB8Q9UJY1 196 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 HIGD1AQ9Y241 93 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 OR2H2O95918 312 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 APELAP0DMC3 54 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 PRF1P14222 555 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 RPL27AP46776 148 aaKnown RBP13.88□□□□□ -0.19
COL2A1-202ENST00000380518 P2RY4P51582 365 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 SLC25A45Q8N413 288 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 CTHRC1Q96CG8 243 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 PXMP4Q9Y6I8 212 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 M0QZK8 103 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 GGCTO75223 188 aaKnown RBP13.88□□□□□ -0.19
COL2A1-202ENST00000380518 PET117Q6UWS5 81 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 OVCH2Q7RTZ1 564 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 AQP3Q92482 292 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 RHOVQ96L33 236 aa13.88□□□□□ -0.19
COL2A1-202ENST00000380518 DHRS7CA6NNS2 312 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 AHRRA9YTQ3 701 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 KCNAB3O43448 404 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 CIDEAO60543 219 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 HIST1H1BP16401 226 aaKnown RBP13.87□□□□□ -0.19
COL2A1-202ENST00000380518 CCL13Q99616 98 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 HSF4Q9ULV5 492 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 PRR33A8MZF0 331 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 PIN1P1O15428 100 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 MC5RP33032 325 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 UNQ9370/PRO34162Q6UXP9 181 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 NPDC1Q9NQX5 325 aaPredicted RBP13.87□□□□□ -0.19
COL2A1-202ENST00000380518 SF3B6Q9Y3B4 125 aaKnown RBP13.87□□□□□ -0.19
COL2A1-202ENST00000380518 IGKV3-7A0A075B6H7 116 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 C4orf51C9J302 202 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 ERVFRD-1P60508 538 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 SELENOTP62341 195 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 KCNMB1Q16558 191 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 DDA1Q9BW61 102 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 CCL21O00585 134 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 CSRP3P50461 194 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 C16orf82Q7Z2V1 217 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 PKIBQ9C010 78 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 HS3ST3B1Q9Y662 390 aa13.87□□□□□ -0.19
COL2A1-202ENST00000380518 HOXB1P14653 301 aaPredicted RBP13.86□□□□□ -0.19
COL2A1-202ENST00000380518 GPR6P46095 362 aaPredicted RBP13.86□□□□□ -0.19
COL2A1-202ENST00000380518 FHL5Q5TD97 284 aa13.86□□□□□ -0.19
COL2A1-202ENST00000380518 ZNF343Q6P1L6 599 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms