RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 OR1S2Q8NGQ3 325 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 SNIP1Q8TAD8 396 aaKnown RBP12.55□□□□□ -0.4
PRNP-201ENST00000379440 RHOFQ9HBH0 211 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 AMDHD2Q9Y303 409 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 IGHV2OR16-5A0A0B4J2B6 119 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 NKX2-6A6NCS4 301 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 OR5H1A6NKK0 313 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 TIMM8AO60220 97 aaPredicted RBP12.55□□□□□ -0.4
PRNP-201ENST00000379440 PTBP3O95758 552 aaKnown RBP12.55□□□□□ -0.4
PRNP-201ENST00000379440 TFF1P04155 84 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 ZNF146Q15072 292 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
PRNP-201ENST00000379440 TRAPPC2LQ9UL33 140 aa12.55□□□□□ -0.4
PRNP-201ENST00000379440 DCHS1Q96JQ0 3298 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 TMEM33P57088 247 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 P2RY6Q15077 328 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 ZNF497Q6ZNH5 498 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 ERGIC1Q969X5 290 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 SMCO4Q9NRQ5 59 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 FBXL17Q9UF56 701 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 TMED3Q9Y3Q3 217 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 SH2D1BO14796 132 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 DLEU1O43261 78 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 FGF16O43320 207 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 HNF1AP20823 631 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 RND3P61587 244 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 ZNF474Q6S9Z5 364 aaPredicted RBP12.54□□□□□ -0.4
PRNP-201ENST00000379440 ZNF695Q8IW36 515 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 SELENOHQ8IZQ5 122 aaKnown RBP12.54□□□□□ -0.4
PRNP-201ENST00000379440 TLNRD1Q9H1K6 362 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 ZDHHC8Q9ULC8 765 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 OR2W1Q9Y3N9 320 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 SLC25A15Q9Y619 301 aa12.54□□□□□ -0.4
PRNP-201ENST00000379440 HEATR1Q9H583 2144 aaKnown RBP12.53□□□□□ -0.4
PRNP-201ENST00000379440 A6NLC8 198 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 PSPNO60542 156 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 PGLYRP1O75594 196 aaPredicted RBP12.53□□□□□ -0.4
PRNP-201ENST00000379440 FAM157CP0CG43 387 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 NFYBP25208 207 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 CD81P60033 236 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 NCMAPQ5T1S8 102 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 H1FOOQ8IZA3 346 aaPredicted RBP12.53□□□□□ -0.4
PRNP-201ENST00000379440 TMEM56Q96MV1 263 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 PRO1933Q9H354 126 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 TMEM56-RWDD3S4R434 201 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 E5RGE8 158 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 HAND1O96004 215 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 GCH1P30793 250 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 ZNF83P51522 516 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 ZNF718Q3SXZ3 478 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 OR4D5Q8NGN0 318 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 CABLES2Q9BTV7 478 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 TAF9BQ9HBM6 251 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 NSG2Q9Y328 171 aa12.53□□□□□ -0.4
PRNP-201ENST00000379440 BSNQ9UPA5 3926 aa12.52□□□□□ -0.4
PRNP-201ENST00000379440 TAAR5O14804 337 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 CDS2O95674 445 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 F12P00748 615 aaPredicted RBP12.52□□□□□ -0.41
PRNP-201ENST00000379440 KITLGP21583 273 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 MDH2P40926 338 aaKnown RBP12.52□□□□□ -0.41
PRNP-201ENST00000379440 AKR1C2P52895 323 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 AKR1C1Q04828 323 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 GAGE1Q13065 139 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 HNF4GQ14541 408 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 DNLZQ5SXM8 178 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 RNF141Q8WVD5 230 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 SEC11CQ9BY50 192 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 CXXC4Q9H2H0 198 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 HES4Q9HCC6 221 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 RCL1Q9Y2P8 373 aaKnown RBP12.52□□□□□ -0.41
PRNP-201ENST00000379440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.52□□□□□ -0.41
PRNP-201ENST00000379440 ST8SIA3O43173 380 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 SLC24A4Q8NFF2 622 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 HIST1H2BAQ96A08 127 aa12.52□□□□□ -0.41
PRNP-201ENST00000379440 PARP12Q9H0J9 701 aaKnown RBP12.52□□□□□ -0.41
PRNP-201ENST00000379440 GAR1Q9NY12 217 aaKnown RBP12.52□□□□□ -0.41
PRNP-201ENST00000379440 ATMQ13315 3056 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 ADAM20O43506 726 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 FBXO24O75426 580 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 MT-ND4LP03901 98 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 SRPXP78539 464 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 GAMTQ14353 236 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 KIAA2026Q5HYC2 2103 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 C1orf185Q5T7R7 199 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 WDR82Q6UXN9 313 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 LRP11Q86VZ4 500 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 OR51H1Q8NH63 302 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 PLEKHA2Q9HB19 425 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 DMXL2Q8TDJ6 3036 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 ITGB1BP1O14713 200 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 UCP1P25874 307 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 TESK1Q15569 626 aa12.51□□□□□ -0.41
PRNP-201ENST00000379440 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms