RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 ZNF665Q9H7R5 613 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 ZFP57Q9NU63 452 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 DUX4Q9UBX2 424 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 CLEC18AA5D8T8 446 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 TUBAL3A6NHL2 446 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 K7EPK0 472 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 SCGB1D2O95969 90 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 GYPAP02724 150 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 S100A1P23297 94 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 EDDM3BP56851 147 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 MSMO1Q15800 293 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 FAM71E2Q8N5Q1 922 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 CLEC18CQ8NCF0 446 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 OR2D2Q9H210 308 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 MS4A5Q9H3V2 200 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 DYNLRB1Q9NP97 96 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 OR6C3Q9NZP0 311 aa12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 LSM5Q9Y4Y9 91 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-204ENST00000378815 PIGBOS1A0A0B4J2F0 54 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 B9A039 149 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 SERPINE2P07093 398 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 CGB3P0DN86 165 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 CGB7P0DN87 165 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 CCL13Q99616 98 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 SPIN2AQ99865 258 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 SPIN2BQ9BPZ2 258 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 ZNF471Q9BX82 626 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 LIN7CQ9NUP9 197 aaKnown RBP12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 RNF150Q9ULK6 438 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 F5H0A9 414 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 TMEM178BH3BS89 294 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 SIGLEC5O15389 551 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 ADAM20O43506 726 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 HKR1P10072 659 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 RAB14P61106 215 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 EIF4EBP1Q13541 118 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 C5orf30Q96GV9 206 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 CISD1Q9NZ45 108 aaKnown RBP12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 ITPR1Q14643 2758 aa12.79□□□□□ -0.36
RAB3IP-204ENST00000378815 DYSFO75923 2080 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 DEFB108AA8MXU0 73 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 LGALS8O00214 317 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 F2RL2O00254 374 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 ST8SIA3O43173 380 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 LOXP28300 417 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 C1orf87Q8N0U7 546 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 PCNPQ8WW12 178 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 AGMATQ9BSE5 352 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 JPT1Q9UK76 154 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 POMT1Q9Y6A1 747 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 RELNP78509 3460 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 DSCAMO60469 2012 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 RNF212BA8MTL3 300 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 E5RGE8 158 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 LOXL3P58215 753 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 SWI5Q1ZZU3 235 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 ZNF585BQ52M93 769 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 STOML3Q8TAV4 291 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 TMEM204Q9BSN7 226 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 PLEKHF2Q9H8W4 249 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 CYTL1Q9NRR1 136 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 TMEM106BQ9NUM4 274 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 NSG2Q9Y328 171 aa12.78□□□□□ -0.36
RAB3IP-204ENST00000378815 ROS1P08922 2347 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 TRAV38-1A0A0B4J264 116 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 IGKV1-39P01597 117 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 IGKV1D-39P04432 117 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 RPL12P30050 165 aaKnown RBP12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 ZNF672Q499Z4 452 aaPredicted RBP12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 FAM216AQ8WUB2 273 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 FAM122AQ96E09 287 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 CALYQ9NYX4 217 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 AUP1Q9Y679 476 aa12.77□□□□□ -0.36
RAB3IP-204ENST00000378815 C17orf58Q2M2W7 97 aa12.77□□□□□ -0.37
RAB3IP-204ENST00000378815 MORN2Q502X0 79 aa12.77□□□□□ -0.37
RAB3IP-204ENST00000378815 GALNT11Q8NCW6 608 aa12.77□□□□□ -0.37
RAB3IP-204ENST00000378815 CCL17Q92583 94 aa12.77□□□□□ -0.37
RAB3IP-204ENST00000378815 PLEKHA2Q9HB19 425 aa12.77□□□□□ -0.37
RAB3IP-204ENST00000378815 GNG12Q9UBI6 72 aa12.77□□□□□ -0.37
RAB3IP-204ENST00000378815 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
RAB3IP-204ENST00000378815 PPIAL4EA0A075B759 164 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 PPIAL4DF5H284 164 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 YPEL1O60688 119 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 PPIAL4FP0DN26 164 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 SLC25A6P12236 298 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 NKX2-1P43699 371 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 LTC4SQ16873 150 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 THOC7Q6I9Y2 204 aaKnown RBP12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 TCF23Q7RTU1 214 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 DMBX1Q8NFW5 382 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 EDARADDQ8WWZ3 215 aa12.76□□□□□ -0.37
RAB3IP-204ENST00000378815 ABHD14BQ96IU4 210 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms