RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MRGPRGQ86SM5 289 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 MAPK1IP1LQ8NDC0 245 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 OR5P3Q8WZ94 311 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 TMEM230Q96A57 120 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 FAM122AQ96E09 287 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 PBDC1Q9BVG4 233 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 SPACA1Q9HBV2 294 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 MPC1Q9Y5U8 109 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 NCKAP5O14513 1909 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 TRAV24A0A0B4J272 114 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 H0YIZ8 118 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 RAMP3O60896 148 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 SRSF10O75494 262 aaKnown RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 RAB11AP62491 216 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 RPL23AP62750 156 aaKnown RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 NHLH1Q02575 133 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 MIDNQ504T8 468 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 RPUSD4Q96CM3 377 aaKnown RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 USB1Q9BQ65 265 aaKnown RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 RTBDNQ9BSG5 229 aaPredicted RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 ABHD14AQ9BUJ0 271 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 RIMS4Q9H426 269 aaPredicted RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 PSENENQ9NZ42 101 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 GHRLQ9UBU3 117 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 OR5B21A6NL26 309 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 LRRC30A6NM36 301 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 TRDCB7Z8K6 153 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 H3BTX0 84 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 DNPH1O43598 174 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 SPINK4O60575 86 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 CNIH1O95406 144 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 MBPP02686 304 aaPredicted RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 IL5P05113 134 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 EGR1P18146 543 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 RPL31P62899 125 aaKnown RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 PNLIPRP3Q17RR3 467 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 C4orf17Q53FE4 359 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 LY6G6FQ5SQ64 297 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 INO80CQ6PI98 192 aaPredicted RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 SLC36A1Q7Z2H8 476 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 LRRC46Q96FV0 321 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 PATZ1Q9HBE1 687 aaKnown RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 NPDC1Q9NQX5 325 aaPredicted RBP6.85□□□□□ -1.31
CKAP2-203ENST00000378037 IGSF10Q6WRI0 2623 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 MAST4O15021 2626 aa6.85□□□□□ -1.31
CKAP2-203ENST00000378037 C12orf77C9JDV5 145 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 RPL36A-HNRNPH2H7BZ11 118 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 MLNRO43193 412 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 NDUFS7O75251 213 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 S100A6P06703 90 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 CD55P08174 381 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF735P0CB33 412 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 FOSL1P15407 271 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 DYNLT3P51808 116 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 CATR1Q13166 79 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 HIST3H3Q16695 136 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 PDLIM3Q53GG5 364 aaPredicted RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 ETV3LQ6ZN32 361 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 STPG2Q8N412 459 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 OR8G5Q8NG78 346 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 SGK494Q96LW2 274 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 SPIN2AQ99865 258 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 SPIN2BQ9BPZ2 258 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 C1QTNF5Q9BXJ0 243 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 ITGB1BP2Q9UKP3 347 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 WIPI2Q9Y4P8 454 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 LRP4O75096 1905 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 A0A0G2JNJ9 132 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 NCBP2LA6PVI3 153 aaKnown RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF724A8MTY0 619 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 AHRRA9YTQ3 701 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 UQCRFS1P47985 274 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 TUSC1Q2TAM9 212 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 FAM122CQ6P4D5 195 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 CBLN2Q8IUK8 224 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 MRPS24Q96EL2 167 aaKnown RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 EGLN1Q9GZT9 426 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 FGF23Q9GZV9 251 aaPredicted RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 CXXC4Q9H2H0 198 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 Q9UFV3 132 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 V9GYS6 101 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 TRGV10A0A0A0MS01 117 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 A0A0D9SG52 128 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 ALX3O95076 343 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 S1PR2O95136 353 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 CD40P25942 277 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 TBR1Q16650 682 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 ESCO2Q56NI9 601 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 PEAR1Q5VY43 1037 aaPredicted RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF660Q6AZW8 331 aaPredicted RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 LHFPL5Q8TAF8 219 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 SCARB1Q8WTV0 552 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 OIT3Q8WWZ8 545 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 C1orf147Q96MC9 270 aaPredicted RBP6.84□□□□□ -1.31
CKAP2-203ENST00000378037 S1PR3Q99500 378 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 FAM117AQ9C073 453 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 PRDM14Q9GZV8 571 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 NGBQ9NPG2 151 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms