RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 REC114Q7Z4M0 266 aa15.27■□□□□ 0.03
GNE-201ENST00000377902 TUSC5Q8IXB3 177 aa15.27■□□□□ 0.03
GNE-201ENST00000377902 KCNS2Q9ULS6 477 aa15.27■□□□□ 0.03
GNE-201ENST00000377902 LAMP3Q9UQV4 416 aa15.27■□□□□ 0.03
GNE-201ENST00000377902 RBM7Q9Y580 266 aaKnown RBP15.27■□□□□ 0.03
GNE-201ENST00000377902 OPN1MWP04001 364 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 CELA3AP09093 270 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 OPN1MW2P0DN77 364 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 OPN1MW3P0DN78 364 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 GZMBP10144 247 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 SPINK14Q6IE38 97 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 FAM53AQ6NSI3 398 aaPredicted RBP15.26■□□□□ 0.03
GNE-201ENST00000377902 LHX4Q969G2 390 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 GPR87Q9BY21 358 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 WDR61Q9GZS3 305 aaKnown RBP15.26■□□□□ 0.03
GNE-201ENST00000377902 DLL3Q9NYJ7 618 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 PLA2G3Q9NZ20 509 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 PITPNC1Q9UKF7 332 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 MED12LQ86YW9 2145 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 MRGPRGQ86SM5 289 aa15.26■□□□□ 0.03
GNE-201ENST00000377902 COL6A3P12111 3177 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 TSTD3H0UI37 97 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 SNRPCP09234 159 aaKnown RBP15.25■□□□□ 0.03
GNE-201ENST00000377902 S100GP29377 79 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 APLNRP35414 380 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 CXCL12P48061 93 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 TMEM41BQ5BJD5 291 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 NCR3LG1Q68D85 454 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 VASH2Q86V25 355 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 SAXO1Q8IYX7 474 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 SLC25A22Q9H936 323 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 PRSS50Q9UI38 385 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 PFN1P07737 140 aaKnown RBP15.25■□□□□ 0.03
GNE-201ENST00000377902 FOLR3P41439 243 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 SPATA46Q5T0L3 261 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 TMEM183AQ8IXX5 376 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 MISP3Q96FF7 219 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 HIST1H2AAQ96QV6 131 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 PCGF1Q9BSM1 259 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 SLC39A9Q9NUM3 307 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 DNAJC13O75165 2243 aa15.25■□□□□ 0.03
GNE-201ENST00000377902 IFNL4K9M1U5 179 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 LYSMD4Q5XG99 296 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 ACSM6Q6P461 480 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 TAF15Q92804 592 aaKnown RBP eCLIP15.24■□□□□ 0.03
GNE-201ENST00000377902 PSMG3Q9BT73 122 aaPredicted RBP15.24■□□□□ 0.03
GNE-201ENST00000377902 URB1O60287 2271 aaKnown RBP15.24■□□□□ 0.03
GNE-201ENST00000377902 SIRPB1O00241 398 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 SELLP14151 372 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 GFRA1P56159 465 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.24■□□□□ 0.03
GNE-201ENST00000377902 FAM58AQ8N1B3 248 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 ZNF664Q8N3J9 261 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 OR5T1Q8NG75 326 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 OR5P3Q8WZ94 311 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 P2RX4Q99571 388 aa15.24■□□□□ 0.03
GNE-201ENST00000377902 CA6P23280 308 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 RPL23P62829 140 aaKnown RBP15.23■□□□□ 0.03
GNE-201ENST00000377902 TMEM241Q24JQ0 296 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 OR5A2Q8NGI9 324 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 WFIKKN1Q96NZ8 548 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 NAT8Q9UHE5 227 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 PRRC2CQ9Y520 2896 aaKnown RBP15.23■□□□□ 0.03
GNE-201ENST00000377902 DOCK10Q96BY6 2186 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 XKRY2A2RUG3 117 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 ZNF705GA8MUZ8 300 aaPredicted RBP15.23■□□□□ 0.03
GNE-201ENST00000377902 SLC25A6P12236 298 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 HBG1P69891 147 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 HBG2P69892 147 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 MEF2BQ02080 365 aaPredicted RBP15.23■□□□□ 0.03
GNE-201ENST00000377902 SLC38A11Q08AI6 406 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 GTF3C1Q12789 2109 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 ZNF66Q6ZN08 573 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 OR1P1Q8NH06 330 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 TMEM37Q8WXS4 190 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 APOBEC3DQ96AK3 386 aaPredicted RBP15.23■□□□□ 0.03
GNE-201ENST00000377902 POM121Q96HA1 1249 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 SRD5A3Q9H8P0 318 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 RNF150Q9ULK6 438 aa15.23■□□□□ 0.03
GNE-201ENST00000377902 A0A1W2PPQ1 181 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 DEGS1O15121 323 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 RAMP3O60896 148 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 CLDN1O95832 211 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 CYC1P08574 325 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 BMP5P22003 454 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 GALR1P47211 349 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 SERF2P84101 59 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 HOXA4Q00056 320 aaPredicted RBP15.22■□□□□ 0.03
GNE-201ENST00000377902 JOSD1Q15040 202 aaPredicted RBP15.22■□□□□ 0.03
GNE-201ENST00000377902 BSXQ3C1V8 233 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 OR51G1Q8NGK1 321 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 HES7Q9BYE0 225 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 CFIP05156 583 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 TCEAL6Q6IPX3 200 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 PPP1R32Q7Z5V6 425 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 FGFRL1Q8N441 504 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 LSM10Q969L4 123 aaKnown RBP15.22■□□□□ 0.03
GNE-201ENST00000377902 CTDSP1Q9GZU7 261 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 PARLQ9H300 379 aa15.22■□□□□ 0.03
GNE-201ENST00000377902 AURKAIP1Q9NWT8 199 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms