RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 PMS2P11Q13670 270 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 NUFIP2Q7Z417 695 aaKnown RBP12.49□□□□□ -0.41
UBA1-202ENST00000377269 P4HA3Q7Z4N8 544 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 C1QL2Q7Z5L3 287 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 RPRMLQ8N4K4 120 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 WNT5BQ9H1J7 359 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 POLR3KQ9Y2Y1 108 aaPredicted RBP12.49□□□□□ -0.41
UBA1-202ENST00000377269 FAM221AA4D161 298 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 ABCA11PQ4W5N1 156 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 CRIP3Q6Q6R5 217 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 ZNF66Q6ZN08 573 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 MRPL41Q8IXM3 137 aaKnown RBP12.49□□□□□ -0.41
UBA1-202ENST00000377269 FAM185AQ8N0U4 392 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 OR2AJ1Q8NGZ0 328 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 C11orf40Q8WZ69 217 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 TMEM54Q969K7 222 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 CLCF1Q9UBD9 225 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 GAB2Q9UQC2 676 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 CACNA1BQ00975 2339 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 TMEM8BA6NDV4 472 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 A6NNC1 897 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 ARSJQ5FYB0 599 aaPredicted RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 TSPO2Q5TGU0 170 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 SLC25A47Q6Q0C1 308 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 ABHD12BQ7Z5M8 362 aaPredicted RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 C20orf196Q8IYI0 205 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 H1FOOQ8IZA3 346 aaPredicted RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 TOMM40LQ969M1 308 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 RBM24Q9BX46 236 aaKnown RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 LYRM2Q9NU23 88 aaPredicted RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 COL6A6A6NMZ7 2263 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 MSTNO14793 375 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 MRPL33O75394 65 aaKnown RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 CDS2O95674 445 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 CD55P08174 381 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 BCL2P10415 239 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 CCL1P22362 96 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 FOXG1P55316 489 aaPredicted RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 PCSK4Q6UW60 755 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 BTNL3Q6UXE8 466 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 CENPVQ7Z7K6 275 aaPredicted RBP12.48□□□□□ -0.41
UBA1-202ENST00000377269 MCEMP1Q8IX19 187 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 OR5C1Q8NGR4 320 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 P2RX4Q99571 388 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 ULBP2Q9BZM5 246 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 SLC2A9Q9NRM0 540 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 GLRX2Q9NS18 164 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 FKBP11Q9NYL4 201 aa12.48□□□□□ -0.41
UBA1-202ENST00000377269 DOCK7Q96N67 2140 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 ELLP55199 621 aaPredicted RBP12.47□□□□□ -0.41
UBA1-202ENST00000377269 FAM3BP58499 235 aaPredicted RBP12.47□□□□□ -0.41
UBA1-202ENST00000377269 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
UBA1-202ENST00000377269 NCR3LG1Q68D85 454 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 C9orf106Q8NAJ2 232 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 OR51G1Q8NGK1 321 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 RTTNQ86VV8 2226 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 TRDCB7Z8K6 153 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 OMGP23515 440 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 RPL29P47914 159 aaKnown RBP12.47□□□□□ -0.41
UBA1-202ENST00000377269 GNG10P50151 68 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 RNPS1Q15287 305 aaKnown RBP12.47□□□□□ -0.41
UBA1-202ENST00000377269 KISS1Q15726 138 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 C9orf135Q5VTT2 229 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 C6orf201Q7Z4U5 140 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 ODF3L1Q8IXM7 274 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 GBGT1Q8N5D6 347 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 NECAP2Q9NVZ3 263 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 LAMP3Q9UQV4 416 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 ZGRF1Q86YA3 2104 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
UBA1-202ENST00000377269 GZMHP20718 246 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 TAS2R30P59541 319 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 RUNX1Q01196 453 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 PRDX4Q13162 271 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 KRTCAP3Q53RY4 240 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 HDHD3Q9BSH5 251 aaPredicted RBP12.46□□□□□ -0.41
UBA1-202ENST00000377269 FAAP24Q9BTP7 215 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 RIMS4Q9H426 269 aaPredicted RBP12.46□□□□□ -0.41
UBA1-202ENST00000377269 LPAR2Q9HBW0 351 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 ZNF319Q9P2F9 582 aa12.46□□□□□ -0.41
UBA1-202ENST00000377269 DHHO43323 396 aa12.46□□□□□ -0.42
UBA1-202ENST00000377269 OR10J1P30954 320 aa12.46□□□□□ -0.42
UBA1-202ENST00000377269 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.42
UBA1-202ENST00000377269 DYNLT3P51808 116 aa12.46□□□□□ -0.42
UBA1-202ENST00000377269 BAXQ07812 192 aa12.46□□□□□ -0.42
UBA1-202ENST00000377269 FOXF2Q12947 444 aa12.46□□□□□ -0.42
UBA1-202ENST00000377269 ACOT6Q3I5F7 207 aaPredicted RBP12.46□□□□□ -0.42
UBA1-202ENST00000377269 OR5D18Q8NGL1 313 aa12.46□□□□□ -0.42
UBA1-202ENST00000377269 OR5L1Q8NGL2 311 aa12.46□□□□□ -0.42
UBA1-202ENST00000377269 TMEM45BQ96B21 275 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms