RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 HCP5Q6MZN7 132 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
GPC6-201ENST00000377047 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 AMELYQ99218 206 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 NAT8Q9UHE5 227 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 TMSB15BA0A087X1C1 80 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
GPC6-201ENST00000377047 SYNGR3O43761 229 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 RD3LP0DJH9 198 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 ZNF645Q8N7E2 425 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 XIRP1Q702N8 1843 aaKnown RBP11.75□□□□□ -0.53
GPC6-201ENST00000377047 SRSF10O75494 262 aaKnown RBP11.75□□□□□ -0.53
GPC6-201ENST00000377047 SCTP09683 121 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 OR4A5Q8NH83 315 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 PLXNA1Q9UIW2 1896 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 IRF3Q14653 427 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 VAMP8Q9BV40 100 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 LHFPL6Q9Y693 200 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 SIRT4Q9Y6E7 314 aaPredicted RBP11.75□□□□□ -0.53
GPC6-201ENST00000377047 WDR73Q6P4I2 378 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 SCNM1Q9BWG6 230 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 IGHV3OR16-12A0A075B7B8 117 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 LMX1BO60663 402 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 CDS2O95674 445 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 ZP3P21754 424 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 ZNF137PP52743 207 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 CALHM1Q8IU99 346 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 C16orf92Q96LL3 132 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 METTL26Q96S19 204 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 LPAR5Q9H1C0 372 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 IGLV1-36A0A0B4J1U3 117 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 DUXBA0A1W2PPF3 345 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 MFNGO00587 321 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 CXorf1O96002 111 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 ACSF3Q4G176 576 aaPredicted RBP11.75□□□□□ -0.53
GPC6-201ENST00000377047 OVCH2Q7RTZ1 564 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 PARD6AQ9NPB6 346 aa11.75□□□□□ -0.53
GPC6-201ENST00000377047 A0A1W2PP11 408 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 CEACAM18A8MTB9 384 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 RHBDL1O75783 438 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 RIGQ13278 110 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 TMEM255AQ5JRV8 349 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 STXBP6Q8NFX7 210 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 DCTN5Q9BTE1 182 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 CALYQ9NYX4 217 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 PAGE4O60829 102 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 HYPMO75409 117 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 RPL7P18124 248 aaKnown RBP11.74□□□□□ -0.53
GPC6-201ENST00000377047 SLC35E3Q7Z769 313 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 OR1L6Q8NGR2 347 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 PRSS1P07477 247 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 CELA3AP09093 270 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 SNRPCP09234 159 aaKnown RBP11.74□□□□□ -0.53
GPC6-201ENST00000377047 PCSK4Q6UW60 755 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 TOMM20LQ6UXN7 152 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 MRPS18AQ9NVS2 196 aaKnown RBP11.74□□□□□ -0.53
GPC6-201ENST00000377047 PITPNC1Q9UKF7 332 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 RAXQ9Y2V3 346 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 RFPL3SP0C7P2 107 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 RANP62826 216 aaKnown RBP11.74□□□□□ -0.53
GPC6-201ENST00000377047 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 B9A039 149 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 TM4SF20Q53R12 229 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 ABHD12Q8N2K0 398 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 GPX7Q96SL4 187 aaPredicted RBP11.74□□□□□ -0.53
GPC6-201ENST00000377047 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 SEC11CQ9BY50 192 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 DCAF16Q9NXF7 216 aa11.74□□□□□ -0.53
GPC6-201ENST00000377047 HELTA6NFD8 242 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 BMPR1BO00238 502 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 MS4A10Q96PG2 267 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 ODAMA1E959 279 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 RGS13O14921 159 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 NUBP1P53384 320 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 RRN3P1Q2M238 152 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 FAM24BQ8N5W8 94 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 WFDC6Q9BQY6 131 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 WNT5BQ9H1J7 359 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 TLNRD1Q9H1K6 362 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 FOXD3Q9UJU5 478 aaPredicted RBP11.73□□□□□ -0.53
GPC6-201ENST00000377047 WDR90Q96KV7 1748 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 FSTP19883 344 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 DCAF12L2Q5VW00 463 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 NUP37Q8NFH4 326 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 PTX4Q96A99 478 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 MFSD2BA6NFX1 497 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 FAM27E3Q08E93 113 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 FAM210BQ96KR6 192 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 LURAP1Q96LR2 239 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 MRPL37Q9BZE1 423 aaKnown RBP11.73□□□□□ -0.53
GPC6-201ENST00000377047 SS18L1O75177 396 aaPredicted RBP11.73□□□□□ -0.53
GPC6-201ENST00000377047 RECKO95980 971 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 VAMP3Q15836 100 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms