RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OR2W1Q9Y3N9 320 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 DOCK7Q96N67 2140 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A10PA6NDY2 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A18PA6NE21 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A16PA6NEW6 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A20PA6NIJ5 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A8PA6NJQ4 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A7PA6NKC0 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A22PA8MWA6 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A12PA8MX19 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A5PA8MXJ8 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A23PA8MXZ1 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 C9J4A7 227 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A15PP0C7V4 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A13PP0C7W8 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A14PP0C7W9 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FAM90A24PP0C7X0 464 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 ZNF16P17020 682 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FOXG1P55316 489 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 ADIRFQ15847 76 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 PRR18Q8N4B5 295 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 OR10J5Q8NHC4 309 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 SPRY4Q9C004 299 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 ZNF552Q9H707 407 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 ZFHX4Q86UP3 3567 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 TRBV24-1A0A075B6N3 115 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 SYNGR2O43760 224 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 NGFP01138 241 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 FTH1P19P0C7X4 201 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 NDUFB7P17568 137 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 TUBG1P23258 451 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 MDH2P40926 338 aaKnown RBP11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 COL10A1Q03692 680 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 RNPS1Q15287 305 aaKnown RBP11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 C6orf15Q6UXA7 325 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 COLCA1Q6ZS62 124 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 MKXQ8IYA7 352 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 OR2Y1Q8NGV0 311 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 CT55Q8WUE5 264 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 PRDM14Q9GZV8 571 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 CDH20Q9HBT6 801 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 VAX2Q9UIW0 290 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 GAB2Q9UQC2 676 aa11.99□□□□□ -0.49
CLCNKA-202ENST00000375692 TSTD3H0UI37 97 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 TNFSF15O95150 251 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 IGKV1-5P01602 117 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 CTXN2P0C2S0 81 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 SRD5A2P31213 254 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 SPANXN5Q5MJ07 72 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ZDHHC23Q8IYP9 409 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 OR10A7Q8NGE5 316 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 OR4C12Q96R67 309 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 PITPNC1Q9UKF7 332 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 LAMA5O15230 3695 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 A0A1W2PR80 420 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ZNF503-AS2A6NEH8 195 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 CD300LBA8K4G0 201 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 DNPH1O43598 174 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 LILRA1O75019 489 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 OPN1MWP04001 364 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 OPN1MW2P0DN77 364 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 OPN1MW3P0DN78 364 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ERVS71-1P61550 626 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 CEACAM21Q3KPI0 293 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 RIPPLY2Q5TAB7 128 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ABLIM2Q6H8Q1 611 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ASCL5Q7RTU5 278 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 C16orf82Q7Z2V1 217 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 MRPL21Q7Z2W9 205 aaKnown RBP11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 LILRB2Q8N423 598 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 PSMF1Q92530 271 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 SMIM7Q9BQ49 75 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 GPR87Q9BY21 358 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 ESPL1Q14674 2120 aa11.98□□□□□ -0.49
CLCNKA-202ENST00000375692 TRAV24A0A0B4J272 114 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 ZNF737O75373 536 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 IGLV2-14P01704 120 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 AMBPP02760 352 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 P04436 131 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 GZMHP20718 246 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 OTX2P32243 289 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 CD81P60033 236 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 LRRC75BQ2VPJ9 315 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 KCNE4Q8WWG9 221 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 IGKV1D-33P01593 117 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 IGKV1-33P01594 117 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 GZMBP10144 247 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 RTP5Q14D33 572 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 MRGPRGQ86SM5 289 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 OR51B6Q9H340 312 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 DEPPQ9NTK1 212 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 LAMP3Q9UQV4 416 aa11.97□□□□□ -0.49
CLCNKA-202ENST00000375692 PINLYPA6NC86 204 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 LRRC3CA6NJW4 275 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms