RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 APOA1P02647 267 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
LSM2-208ENST00000375661 CD3GP09693 182 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 ELK1P19419 428 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 COX7A1P24310 79 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 SOX6P35712 828 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 ARL6IP1Q15041 203 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 C6orf183Q5T699 404 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 FAM53AQ6NSI3 398 aaPredicted RBP9.74□□□□□ -0.85
LSM2-208ENST00000375661 MZT2AQ6P582 158 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 OR1L1Q8NH94 360 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 DGCR14Q96DF8 476 aaKnown RBP9.74□□□□□ -0.85
LSM2-208ENST00000375661 NXF2Q9GZY0 626 aaKnown RBP9.74□□□□□ -0.85
LSM2-208ENST00000375661 TMEM133Q9H2Q1 129 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 MIXL1Q9H2W2 232 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 TAF9BQ9HBM6 251 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 CHMP1AQ9HD42 196 aaPredicted RBP9.74□□□□□ -0.85
LSM2-208ENST00000375661 Q9N2K0 584 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 C12orf4Q9NQ89 552 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 DIABLOQ9NR28 239 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 TBL2Q9Y4P3 447 aaKnown RBP9.74□□□□□ -0.85
LSM2-208ENST00000375661 KIAA2026Q5HYC2 2103 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 A0A087X0M5 115 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 A0A1B0GX30 115 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 FAM172BPA6NC97 362 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 A6NDX4 124 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 A6NHS1 94 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 F2RL2O00254 374 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 SSX5O60225 188 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 HBZP02008 142 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 PTHLHP12272 177 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 CD34P28906 385 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 DYNLT3P51808 116 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 ARFRP1Q13795 201 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 HABP2Q14520 560 aaPredicted RBP9.73□□□□□ -0.85
LSM2-208ENST00000375661 HMGN3Q15651 99 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 LTC4SQ16873 150 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 PNLIPRP3Q17RR3 467 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 HACD4Q5VWC8 232 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 TRAT1Q6PIZ9 186 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 ZNF554Q86TJ5 538 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 OR11H6Q8NGC7 330 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 OR13D1Q8NGV5 346 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 SETD6Q8TBK2 473 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 MALSU1Q96EH3 234 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 RCC1LQ96I51 464 aaKnown RBP9.73□□□□□ -0.85
LSM2-208ENST00000375661 WWC2-AS2Q96NR7 200 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 DCUN1D5Q9BTE7 237 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 AUNIPQ9H7T9 357 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 ZNF286AQ9HBT8 521 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 ABCB10Q9NRK6 738 aa9.73□□□□□ -0.85
LSM2-208ENST00000375661 ZNF230Q9UIE0 474 aaPredicted RBP9.73□□□□□ -0.85
LSM2-208ENST00000375661 IGKV1D-8A0A087WSZ0 117 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 IGHV2-26A0A0B4J1V2 119 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 IGHV3-43A0A0B4J1X8 118 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 ODF3BA8MYP8 253 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 HLA-DQB1P01920 261 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 FCGR3AP08637 254 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 IGHV3-43DP0DP04 118 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 IGLL1P15814 213 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 NFYBP25208 207 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 TAS2R20P59543 309 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 CD83Q01151 205 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 LDLRAD2Q5SZI1 272 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 ZNF626Q68DY1 528 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 OR52W1Q6IF63 320 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 C11orf87Q6NUJ2 197 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 CCBE1Q6UXH8 406 aaPredicted RBP9.72□□□□□ -0.85
LSM2-208ENST00000375661 MOB1BQ7L9L4 216 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 ABHD12Q8N2K0 398 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 PRR18Q8N4B5 295 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 OR52M1Q8NGK5 317 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 NUDCD2Q8WVJ2 157 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 MAFIPQ8WZ33 124 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 LEAP2Q969E1 77 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 CLEC7AQ9BXN2 247 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 GFOD1Q9NXC2 390 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 KCNIP1Q9NZI2 227 aa9.72□□□□□ -0.85
LSM2-208ENST00000375661 COL7A1Q02388 2944 aa9.71□□□□□ -0.85
LSM2-208ENST00000375661 FAM25AB3EWG3 89 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 FAM25CB3EWG5 89 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 FAM25GB3EWG6 89 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 SPINT2O43291 252 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 IGHV3-7P01780 117 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 SCTP09683 121 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 PF4V1P10720 104 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 PAX6P26367 422 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 VDAC2P45880 294 aaPredicted RBP9.71□□□□□ -0.86
LSM2-208ENST00000375661 GNG2P59768 71 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 HLA-DRB3P79483 266 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 MADCAM1Q13477 382 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 DCTN2Q13561 401 aaKnown RBP9.71□□□□□ -0.86
LSM2-208ENST00000375661 SRSF7Q16629 238 aaKnown RBP eCLIP9.71□□□□□ -0.86
LSM2-208ENST00000375661 ARSJQ5FYB0 599 aaPredicted RBP9.71□□□□□ -0.86
LSM2-208ENST00000375661 TMEM69Q5SWH9 247 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 LHFPL4Q7Z7J7 247 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 LAX1Q8IWV1 398 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 OR52L2PQ8NGH6 319 aa9.71□□□□□ -0.86
LSM2-208ENST00000375661 MCFD2Q8NI22 146 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms