RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 OR4F17Q8NGA8 305 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 CCL17Q92583 94 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 STARD4Q96DR4 205 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 SH3BGRL3Q9H299 93 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 ROS1P08922 2347 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A10PA6NDY2 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A18PA6NE21 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A16PA6NEW6 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A20PA6NIJ5 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A8PA6NJQ4 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A7PA6NKC0 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A22PA8MWA6 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A12PA8MX19 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A5PA8MXJ8 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A23PA8MXZ1 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 CXorf1O96002 111 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A15PP0C7V4 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A13PP0C7W8 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A14PP0C7W9 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 FAM90A24PP0C7X0 464 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 EFNB1P98172 346 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 ELOBQ15370 118 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 TEPPQ6URK8 271 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 SPNS3Q6ZMD2 512 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 GTF2H5Q6ZYL4 71 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 C11orf42Q8N5U0 333 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 OR2M7Q8NG81 312 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 RNF2Q99496 336 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 RARRES2Q99969 163 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 M0QZK8 103 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 GGCTO75223 188 aaKnown RBP9.98□□□□□ -0.81
PTCH1-203ENST00000375274 IGHMP01871 453 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 CD1BP29016 333 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 CARHSP1Q9Y2V2 147 aaKnown RBP9.98□□□□□ -0.81
PTCH1-203ENST00000375274 PLXNA1Q9UIW2 1896 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 ARHGEF17Q96PE2 2063 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-203ENST00000375274 CHD5Q8TDI0 1954 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 SOX8P57073 446 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 MDP1Q86V88 176 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 OR1L6Q8NGR2 347 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 ZNF596Q8TC21 504 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 TAF15Q92804 592 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTCH1-203ENST00000375274 SEBOXQ9HB31 216 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-203ENST00000375274 NCOR1O75376 2440 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 PDCD11Q14690 1871 aaKnown RBP9.97□□□□□ -0.81
PTCH1-203ENST00000375274 FREM3P0C091 2139 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 NHLH1Q02575 133 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 RPEQ96AT9 228 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 TRAV14DV4A0A0A6YYC5 116 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 CXorf65A6NEN9 183 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 M0R2Z0 102 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 SYNGR1O43759 233 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 PGLYRP1O75594 196 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-203ENST00000375274 ZNF25P17030 456 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-203ENST00000375274 RIPPLY2Q5TAB7 128 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 C19orf35Q6ZS72 473 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 PDPNQ86YL7 162 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 EIF4E3Q8N5X7 224 aaKnown RBP9.97□□□□□ -0.81
PTCH1-203ENST00000375274 GPR146Q96CH1 333 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 OR4C12Q96R67 309 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 LOC101059948A0A1B0GTJ6 334 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 CDX1P47902 265 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-203ENST00000375274 TMEM187Q14656 261 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 TMEM108Q6UXF1 575 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 SLC25A45Q8N413 288 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 NHLRC2Q8NBF2 726 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 SRSF10O75494 262 aaKnown RBP9.97□□□□□ -0.81
PTCH1-203ENST00000375274 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 HFEQ30201 348 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 TPRX1Q8N7U7 411 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 TBX15Q96SF7 602 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
PTCH1-203ENST00000375274 J3QRE1 110 aa9.96□□□□□ -0.81
PTCH1-203ENST00000375274 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.81
PTCH1-203ENST00000375274 RAB24Q969Q5 203 aa9.96□□□□□ -0.81
PTCH1-203ENST00000375274 P2RX4Q99571 388 aa9.96□□□□□ -0.81
PTCH1-203ENST00000375274 RNF24Q9Y225 148 aa9.96□□□□□ -0.81
PTCH1-203ENST00000375274 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.81
PTCH1-203ENST00000375274 TRGV8A0A0C4DH27 118 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 TEX50A0A1B0GTY4 177 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 TMEM210A6NLX4 147 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 TMPRSS2O15393 492 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 NDUFB4O95168 129 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 UCP3P55916 312 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 INO80CQ6PI98 192 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-203ENST00000375274 C1QL2Q7Z5L3 287 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 MOGAT3Q86VF5 341 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 FGFRL1Q8N441 504 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 LRRC75AQ8NAA5 344 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 PCGF1Q9BSM1 259 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 ABHD14AQ9BUJ0 271 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 NPVFQ9HCQ7 196 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 CLEC1BQ9P126 229 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 RALGAPA2Q2PPJ7 1873 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 NYNRINQ9P2P1 1898 aaKnown RBP9.96□□□□□ -0.82
PTCH1-203ENST00000375274 PQLC2LA1A4F0 135 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 LRRC3CA6NJW4 275 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms